Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  310 bits (795), Expect = 1e-88
 Identities = 196/574 (34%), Positives = 309/574 (53%), Gaps = 26/574 (4%)

Query: 157 HKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQ-----AWSTLDV-------LVFG 204
           H+R +   +  S + +I  L  P+   + +D V+  Q      W  + V       ++F 
Sbjct: 15  HQRQVLSAIACSILNKIFDLAPPVLIGMAVDVVVQRQDSWLAKWGVVPVEQQLGLLVLFS 74

Query: 205 LVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRE 264
            VI   +E +   L  +Q+   A  +  +L L    HL  L L FF+ R  G +++ + +
Sbjct: 75  FVIWS-LESLFEYLYAWQWRTLAQTLQHELRLDAYGHLQELELSFFEERSTGQLLSVLND 133

Query: 265 -LDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQ 323
            ++ +  FL      +      +      M+ LS  + GL I  +P  +    W + R Q
Sbjct: 134 DINQLERFLDHGANEILQVTTTVLAVGGAMAYLSPTVAGLAILPIPVIL----WGSLRFQ 189

Query: 324 AAIEKQFSHAAANTSFLTETVA----GSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQ 379
             +  +++        ++  +A    G  T+KS   E     R  E ++           
Sbjct: 190 RRLAPRYARVREQAGLISARLANNLGGIATIKSFTAEAFEKGRVAEDSDAYRQANRRAIA 249

Query: 380 LNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWG 439
           L++    L++       +AIL++G  E ++  + +G       +T  +  PL  +  +  
Sbjct: 250 LSSAFVPLIRFAILFAFIAILYVGGMETINGRLDVGTYSFLVFITQRLLWPLTSLGRVLD 309

Query: 440 QFIQTRVAIEKLGDMLNLPVEQHTGSDNVTIS---GAISFKNILFRYQPDIPPTINDLSL 496
            + +   + +++ D+L +PV+  +G  ++ I    GA+ F+ I F Y+ D  P++ DL+L
Sbjct: 310 DYQRAMASTQRVMDLLAIPVQIPSGRQSLPIGQVQGAVQFEGITFAYR-DREPSVIDLNL 368

Query: 497 DIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQ 556
           +I AG+T+ +VG +GSGKSTL +LLLR Y P+ G I +DGI L  + ++ LRQ +G V Q
Sbjct: 369 NIPAGQTIAIVGATGSGKSTLVKLLLRFYEPQTGRILLDGIDLRDLKLKDLRQAIGFVSQ 428

Query: 557 ENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQ 616
           + FLFH SV+ENIA    +A+  EI +AAKL+ AH+FI+ LP GYDTV+ E GQ LSGGQ
Sbjct: 429 DVFLFHGSVAENIAYGSFDATQTEIEQAAKLAEAHEFIMDLPQGYDTVVGERGQKLSGGQ 488

Query: 617 RQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDC 676
           RQRLAIAR +L DP +LILDEATSA+D+E++A IQ ++  I R RT + IAHRLST+R  
Sbjct: 489 RQRLAIARAILKDPPILILDEATSAVDNETEAAIQRSLEQITRDRTTLAIAHRLSTIRHA 548

Query: 677 DRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
           D I V+ QG +VE G H +LLA    Y  LW++Q
Sbjct: 549 DCIYVMDQGRLVEAGHHDELLALDGLYANLWKVQ 582