Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  274 bits (701), Expect = 8e-78
 Identities = 186/579 (32%), Positives = 301/579 (51%), Gaps = 24/579 (4%)

Query: 151 IPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTL---------DVL 201
           +P   +HKR+L   L+    L +   + P+     +  +     W  L         ++L
Sbjct: 18  LPYLGRHKRLLIGSLILLVPLALAGAVQPMLVGQAISVLQNKPTWEMLQGMSRSQGLNLL 77

Query: 202 VFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTR 261
              L+ T V+ +  RG++ Y       R+   +   L QH+  L + FF    VG +VTR
Sbjct: 78  SLALLATIVVRLAFRGVQGYYVQEVGQRVTADIRQDLFQHVTALAVRFFDRTPVGKLVTR 137

Query: 262 V-RELDTIRE-FLTGSMFTLT--VELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWW 317
           +  +++ + E F TG++  L+  V LL + + ++ +    A L  L +  +P   ++ ++
Sbjct: 138 LTNDVEALGEVFSTGAIGILSDIVSLLAIAIAMFWLQWQLALL--LTVLLLPTTAVILYF 195

Query: 318 LTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDV 377
                +A    +   +  N S L E + G   ++S   E    +++    ++ +      
Sbjct: 196 QRRYRKANYRAREELSNLNAS-LQENMVGIGIVQSFRREAYNAQQFRVANQRYLEAVDRT 254

Query: 378 QQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVEL 437
              ++  +  ++ +      A+LWLG+  VL  +M  G L AF + +  +  PL ++ E 
Sbjct: 255 IFHDSAISATLEWISLAAIAAVLWLGSFLVLQDQMNFGLLAAFILYSQRLFDPLRQLAEK 314

Query: 438 WGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVTIS------GAISFKNILFRYQPDIPPTI 491
           +        AIE++ D+ N P+E    +    +S      G I F+N+ F Y+PD  P I
Sbjct: 315 FTSIQAGFTAIERIVDIFNEPIEIRDAAQTQQLSLETSQSGEIHFENVWFGYKPD-EPVI 373

Query: 492 NDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRV 551
            +L++ I+ G+ + +VG +G+GKST+ RLL RLY P QG I IDGI + ++   +LR+ +
Sbjct: 374 QNLNITIQPGQKVALVGPTGAGKSTIIRLLCRLYEPTQGRILIDGIDIRNLPQVELRRHL 433

Query: 552 GVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQS 611
           GV+LQ+ FLF   VS NI   +P    E +  AA+ +     I  LP GY T L E G +
Sbjct: 434 GVILQDGFLFAGDVSSNITLGEPYDQ-EAVQAAARRTNVATLIESLPQGYATPLRERGTN 492

Query: 612 LSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLS 671
           LSGGQRQ LA AR  + DPKVLILDEAT+ LD  ++A++Q  +  +   RT I IAHRLS
Sbjct: 493 LSGGQRQLLAFARVAIRDPKVLILDEATANLDVGTEALVQEALDDLLSDRTAIIIAHRLS 552

Query: 672 TVRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
           T+R+ DRI+VL QG ++E GSH  L+A    Y  L++LQ
Sbjct: 553 TIRNADRILVLRQGQLIEDGSHDVLMARNGLYTSLYRLQ 591