Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  287 bits (734), Expect = 1e-81
 Identities = 162/491 (32%), Positives = 273/491 (55%), Gaps = 4/491 (0%)

Query: 224 AHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRE-LDTIREFLTGSMFTLTVE 282
           A  A +I   L +   +H+  L L +F+  + G +  R+ E +D + E +       T  
Sbjct: 89  AKAALQIAYNLRVNTYRHIQSLSLSYFEKAKTGDLTYRMTEDIDRVGEVVNKVFHDATPS 148

Query: 283 LLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTE 342
           +L + V L  M  L+  LT   +   P    L  W   +M     +  S  +  +S LTE
Sbjct: 149 ILQLIVVLSYMIYLNWTLTLAILVIAPIMGFLVGWFGQQMLVFSRRSQSRISDLSSLLTE 208

Query: 343 TVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWL 402
             +G   +++ A EP  I R+  + E+     Y    L      ++  LQ  + + I+ L
Sbjct: 209 VFSGIRLVRAFAAEPYEIERFSREAERNREARYRTAWLRAIQYPVIGFLQAASILFIVVL 268

Query: 403 GATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNL-PVEQ 461
           G+ ++ + ++    L ++      +  P+  +++ + +F Q + +++++ ++L++ P  Q
Sbjct: 269 GSWQISTGQLNGPNLGSYVAAIAMLIDPIVHLIDNFNEFKQGQASLDRIDELLSIEPAVQ 328

Query: 462 HTGSDNVT--ISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLAR 519
                 +   I+G + F+ + F Y+ D  P +  L+L +  GE + +VG SG+GKSTL  
Sbjct: 329 EDPQSRMLPPITGKVEFRQVSFSYRSDSAPVLRQLNLTVEPGEAVALVGASGAGKSTLVN 388

Query: 520 LLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLE 579
           L+ R Y P+ G I +DGIP+  + +  LR+++G+V QE  LF  ++++NIA  + +    
Sbjct: 389 LIPRFYDPQDGEILVDGIPIRSVTLGSLRRQIGIVPQETILFSGTIAQNIAFGQRQFDRA 448

Query: 580 EIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEAT 639
            + EAA+++ AH FI ++P GYDT + E G +LSGGQRQRLAIAR +L DP++LILDEAT
Sbjct: 449 AVEEAARIANAHQFISQMPDGYDTWVGERGVNLSGGQRQRLAIARAVLLDPRILILDEAT 508

Query: 640 SALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQQLLAY 699
           SALD ES+ ++Q  +  + +GRTV  IAHRL+TVR+  RI+V+ +G IVE G+H  LLA 
Sbjct: 509 SALDSESETLVQEALERVMQGRTVFIIAHRLATVRNASRILVMERGQIVEAGNHDALLAE 568

Query: 700 GKQYKQLWQLQ 710
             +Y + +  Q
Sbjct: 569 AGRYARYYAQQ 579