Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  253 bits (646), Expect = 2e-71
 Identities = 188/577 (32%), Positives = 294/577 (50%), Gaps = 25/577 (4%)

Query: 159 RVLSEILLFSFVLQILALISPLFFQVVMDKV--------LVHQAWSTLDVLVFGLVITGV 210
           RV+   ++      +L L+ P FF+   D +         + Q  +   +LV    +  +
Sbjct: 36  RVVWATVILVIAKAVLVLV-PYFFKWATDALNNKPDALGFLPQFLTGAVMLVLAYNLARL 94

Query: 211 IEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIRE 270
           ++  L  LR+  +A        QL  K   H+  L L F   R+ G + +R+ E  T + 
Sbjct: 95  LQAGLNQLRDALFASVGQHAVRQLAYKTFVHMHQLSLRFHLERRTGGL-SRIIERGT-KG 152

Query: 271 FLTGSMFTL--TVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRM---QAA 325
             T   FT+  +V  L  F+   V+       T L +  V  ++ +  W T R    + A
Sbjct: 153 IETIVRFTILNSVPTLIEFLLTAVIFWWGYGFTYLLVTAVTVWLYI--WFTVRASDWRIA 210

Query: 326 IEKQF--SHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNR 383
           I +    S   ANT  + +++   ET+K    E    +R+D+  E+       V      
Sbjct: 211 IRRSMNDSDTDANTKAI-DSLLNFETVKYFGNEEMEAKRFDKSMERYERAATQVWTSLGW 269

Query: 384 SNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQ 443
            N    L+    +  ++ + A  V   E TIG  +  N M   +A PL  +  ++ +  Q
Sbjct: 270 LNFGQALIFGAGTAVMMTISALAVQRGEQTIGDFVFINAMLIQLAIPLNFIGFVYREIRQ 329

Query: 444 TRVAIEKLGDMLNLPVE--QHTGSDNVTIS-GAISFKNILFRYQPDIPPTINDLSLDIRA 500
               IE + D+L++  E      +  + I  GAI+FKN+ F Y P   P +  +S ++ A
Sbjct: 330 GLTDIEHMFDLLDVRAEVVDRPNAKELKIERGAIAFKNVQFAYDP-ARPILKGISFEVPA 388

Query: 501 GETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFL 560
           G+T+ VVG SG+GKSTL+RLL R Y  ++GSITIDG  +  +  + LR  +G+V Q+  L
Sbjct: 389 GKTVAVVGPSGAGKSTLSRLLYRFYDVQEGSITIDGQDVRDVTQKSLRSVIGMVPQDTVL 448

Query: 561 FHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRL 620
           F+ +++ NI   +  AS  E+  AA+ +   DFI  LP G+  ++ E G  LSGG++QR+
Sbjct: 449 FNDTIAYNIRYGRVTASDAEVEAAAEAAQIADFIRDLPEGFRAMVGERGLKLSGGEKQRV 508

Query: 621 AIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRII 680
           AIART+L  P +LILDEATSALD +++  IQA +  ++R RT + IAHRLSTV + D II
Sbjct: 509 AIARTILKAPPILILDEATSALDTKTEQEIQAALDIVSRNRTTLVIAHRLSTVINADEII 568

Query: 681 VLHQGTIVEQGSHQQLLAYGKQYKQLWQLQQELKQEE 717
           VL  G I E+G+H +L+  G  Y  +W  Q+E  Q E
Sbjct: 569 VLKDGVIAERGTHGELIDRGGLYASMWSRQREATQAE 605