Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., toxin secretion ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  276 bits (707), Expect = 2e-78
 Identities = 175/629 (27%), Positives = 317/629 (50%), Gaps = 14/629 (2%)

Query: 82  IESLKTPAILFDQHDLPFITAKTNKDKCLIQRPNKETPEVISSHELNSTWNKKSLVIQQ- 140
           I  +  P IL  +     +  +   +K +IQ P     E +   +L + +     +++Q 
Sbjct: 82  ISPIMMPCILLLKDKKACLLRELTSEKAVIQLPETGGEETLPVEQLETLYVGYLFLVKQQ 141

Query: 141 --AQSRFDIT-------WFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLV 191
                RFD+        W +        +  + L+ S ++ + AL+SPLF   V DKV+ 
Sbjct: 142 YRGDMRFDVHHHDNKSHWLLKTLKDAAPIYRDALIASVLVNLFALVSPLFIMNVYDKVVP 201

Query: 192 HQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFK 251
           + A+ +L VL  G  I  + ++V+R LR Y       ++DI +  +L     G+PL   +
Sbjct: 202 NLAFESLWVLAIGAGIAYIFDLVMRQLRSYLIDVAGKKVDIIVSSQLFAKAVGIPLSK-R 260

Query: 252 SRQVGAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCY 311
           S  VG +  ++ E D+IR+ LT +  T  V+L F   FL ++ +++  L  L +      
Sbjct: 261 SPSVGGMAKQLGEFDSIRDILTSATITTLVDLPFAVFFLIIIFIVAGDLAVLPLLGGAII 320

Query: 312 VLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMV 371
           +    ++ P+++AAI++    A+     L E++A  E++K+   E    + W +      
Sbjct: 321 IGYTLYIQPKLKAAIDESNKFASLKHGHLIESLAALESIKAYGAEGLVQKSWQQMIGHTA 380

Query: 372 TTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPL 431
                 ++L+N  +++   + ++T V ++ LG   V    +++G +IA  M+++    P+
Sbjct: 381 NWQLKAKKLSNSVSNVASFMVQLTVVGVVILGVYRVADNAISMGGIIAAVMLSSRAMSPM 440

Query: 432 ARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNVT---ISGAISFKNILFRYQPDIP 488
           A++  L  +   T  A+ +L  ++    E       V+   + G I   ++ F Y     
Sbjct: 441 AQLASLLTRANHTASALRQLDQIMTQEDEFENKGHLVSKTRLMGKIEADHVSFCYPGSEK 500

Query: 489 PTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLR 548
           P ++  SL I+ GE + ++G +GSGKSTLA+LL  LY P +GS+  DGI    I+   LR
Sbjct: 501 PVLHPTSLSIQPGEKVAIIGRNGSGKSTLAKLLCGLYKPTKGSLRYDGIDSAQIHPSDLR 560

Query: 549 QRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEG 608
           +  G + Q+  LFH S+ +NI     + S  ++I A ++SG   F      G D  + EG
Sbjct: 561 RNFGYLPQDVVLFHGSIRDNILFGTRQVSEHQLIRAVQISGVSLFTNLESEGLDQQVGEG 620

Query: 609 GQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAH 668
           GQ+LS GQRQ +A+AR  L+DP +L++DE T++LD  ++      M  +++ RT++ I H
Sbjct: 621 GQALSRGQRQTVALARATLNDPPILLMDEPTASLDARAEKQFIRAMEHVSKDRTLVIITH 680

Query: 669 RLSTVRDCDRIIVLHQGTIVEQGSHQQLL 697
           ++  ++  DR+IVL +G ++  G    +L
Sbjct: 681 KMHLLKLVDRVIVLDRGHVLADGPKNDVL 709