Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  273 bits (698), Expect = 2e-77
 Identities = 184/576 (31%), Positives = 306/576 (53%), Gaps = 32/576 (5%)

Query: 154 FLQHKRVLSEILLFSFVLQI-LALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIE 212
           F++  RVL  +   + VL   L+L  PL  + V+D   + +A          LVI  ++ 
Sbjct: 29  FMRPYRVLMAMATLALVLTAGLSLTLPLAVRRVVDNFRISEAALLNQYFAAALVIAALLA 88

Query: 213 VVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFL 272
           V   GLR         R+   +   +   + G+   FF+    G +++R+    T+ + +
Sbjct: 89  VGT-GLRYALVTRLGERVVADIRKAVFDRVIGMSPAFFEQIMTGEVLSRITTDTTLIQSV 147

Query: 273 TGSMFTLTVELLFMFVF-LYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFS 331
            GS  ++ +  + +F+  L +M L SA LT L +  VP  ++    L  R++    +   
Sbjct: 148 LGSSVSIALRNMLIFIGGLVLMLLTSAKLTSLVLLIVPAVIVPILVLGRRLRKISRENQD 207

Query: 332 HAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDV--QQLNNRSNHLVQ 389
             AA++    E +   +T+++   E      +   TE    T +DV  +++  R+   V 
Sbjct: 208 WIAASSGNAGEALGAVQTVQAYTHEVASRSEFSRLTE----TAFDVSMRRIQTRAFLTVI 263

Query: 390 LLQKITS--VAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVA 447
           ++  + S  V +LW+GA +V +  M+ G L+ F +    +A  +A + E+W +  +   A
Sbjct: 264 VIFLVFSGVVGVLWMGANDVRAGIMSEGTLVQFVIYAVLVAGSVAALSEIWSELQRAAGA 323

Query: 448 IEKLGDMLNLPVEQHTGSDNVT-----------ISGAISFKNILFRY--QPDIPPTINDL 494
            E+L ++L       T  D V            + G I F ++ FRY  +P IP  + D+
Sbjct: 324 TERLVELL-------TAVDQVQDPYAPRALAAPVRGEIRFDDVSFRYPARPQIPALV-DV 375

Query: 495 SLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVV 554
           SL ++ GET+  VG SG+GK+T+ +++ R Y P  G++ +DG PL  +     RQ + +V
Sbjct: 376 SLTVQPGETVAFVGPSGAGKTTIIQMIQRFYDPTSGAVCLDGRPLRDLQRDDFRQHIALV 435

Query: 555 LQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSG 614
            Q+  +F  S  +NI   +P AS  E+  AA+ + AHDFI  LP GYD+ + E G  LSG
Sbjct: 436 PQDPVIFALSARDNIRFGRPGASDAEVEAAARAAAAHDFISALPEGYDSQVGERGVMLSG 495

Query: 615 GQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVR 674
           GQ+QR+AIAR +L D  VL+LDEATSALD ES+ ++QA +  +++GRT + +AHRL+TV+
Sbjct: 496 GQKQRIAIARAILRDAPVLLLDEATSALDAESERLVQAAVDELSQGRTTLIVAHRLATVK 555

Query: 675 DCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
             DRI+V+ +G I+  G+H QL+A    Y +L +LQ
Sbjct: 556 KADRIVVMEEGRIIATGTHDQLVAEDGLYARLARLQ 591