Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., ABC transporter related (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  261 bits (667), Expect = 7e-74
 Identities = 170/576 (29%), Positives = 300/576 (52%), Gaps = 6/576 (1%)

Query: 140 QAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLD 199
           Q QS   I   +  F  +K  +   +L   V+ +    S    +  +D++ +++    L 
Sbjct: 12  QGQSIHLIKRCLKYFRPYKGQIFLSMLAMGVVSLSTAGSAWLVKPALDEIFINKDEQALL 71

Query: 200 VLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIV 259
            +     +  +++   R ++ Y   ++  R+  +L  +L   +  LPL F++  QVG ++
Sbjct: 72  YVPLLFFVLTLVKGAGRYVQNYFMQYSGLRVLEKLRSELYDKIIYLPLQFYEESQVGMLM 131

Query: 260 TRV-RELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWL 318
           +R+  ++  IR  L  S+  +  +LL M   + V+   +  L    +  +P  +    W 
Sbjct: 132 SRIINDVTMIRNSLP-SIVMMVRQLLTMLGLVGVVFYQNPRLAVWAVLVLPAALYPLVWF 190

Query: 319 TPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQ 378
             +++    +  S  A  +  L E  +G   +K+ A E    RR+D++ E++        
Sbjct: 191 GRKLRKYGRRNQSKLADISVVLQEVFSGIRVVKAFATERHEARRFDDENERLARLYLKQA 250

Query: 379 QLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELW 438
            ++  S+ +++L+  +    ++W G  EV++ E T G   +F      +  P+  +    
Sbjct: 251 SVSELSSPIMELIGAVGIGLVIWFGGHEVIAGETTAGTFFSFVAALAMMYDPVKSLNSYN 310

Query: 439 GQFIQTRVAIEKLGDMLNLP---VEQHTGSDNVTISGAISFKNILFRYQPDIPPTINDLS 495
            +  +     E++ ++L+ P   VEQ   +        + F  + F Y     P ++++S
Sbjct: 311 MEVQRALAGAERVFEILDAPELTVEQGGDTPFDEPFRELRFDGVTFTYGSKTAPALDNVS 370

Query: 496 LDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVL 555
           L +RAGE + +VG SG+GKST   L+ R Y P+QG+I ++G P++   ++ LR+ V +V 
Sbjct: 371 LTVRAGERVAIVGPSGAGKSTFVNLIPRFYEPQQGAIILNGRPVSDYTLETLRRNVSMVS 430

Query: 556 QENFLFHKSVSENIAQSKPEASLEEIIEAAKLSG-AHDFILKLPMGYDTVLAEGGQSLSG 614
           Q+ FLF+  V +NI      A  E+ + AA +S  A +FI +LP GYDT+L E G  LSG
Sbjct: 431 QDTFLFNLPVRDNITYGLSGAIDEDTVRAAAMSAYADEFIRELPEGYDTLLGERGVKLSG 490

Query: 615 GQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVR 674
           GQ+QRL IAR ++ D  +LILDEATSALD E++ ++Q  + ++   RT I IAHRLST+ 
Sbjct: 491 GQKQRLTIARAIMKDAPLLILDEATSALDSEAERIVQKALDNLMENRTSIVIAHRLSTIL 550

Query: 675 DCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
             DRI+V+ QG IV+ G H++LLA    Y +L+ +Q
Sbjct: 551 SADRILVMEQGRIVDAGRHEELLARCPMYARLYAMQ 586