Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., ABC transporter, transmembrane region: ABC transporter from Marinobacter adhaerens HP15

 Score =  261 bits (666), Expect = 9e-74
 Identities = 174/556 (31%), Positives = 282/556 (50%), Gaps = 16/556 (2%)

Query: 160 VLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLR 219
           +L  + +   V Q  + ++ L F+   +++ +      L VL F  +  G  E +   L 
Sbjct: 48  ILIGVAIDVVVNQEESFVAGLGFETAQEQITI------LAVLTF-FIWAG--ESLFEYLF 98

Query: 220 EYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRE-LDTIREFLTGSMFT 278
           +  + + A R+   L     +H   L + FF++R  G +V  + + ++ +  FL G    
Sbjct: 99  QILWRNLAQRLQSDLRQDAYEHAQRLDMSFFEARSSGQLVATMNDDVNQLERFLDGGANA 158

Query: 279 LTVELLFMFVFLYVMSLLSAPLTGLFIAT-VPCYVLLAWWLTPRMQAAIEKQFSHAAANT 337
           + +++L   V +  +  + +PL  L   T +P  +  A++   +               +
Sbjct: 159 M-IQVLVTVVAVGAVFFVLSPLIALLAFTPIPLIIWGAFYFQRKAGPLYADVREKVGDLS 217

Query: 338 SFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSV 397
           S L   + G  T+KS   E R  +R  E +E  V       ++++    ++++      +
Sbjct: 218 SRLANNLGGIATIKSFTAEQREAKRLKESSEAYVEANRRAIRISSAFIPVIRMAILAGFL 277

Query: 398 AILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNL 457
           A   +G    L   + +G       +T  +  PL  + E+   F +   +  ++ D+L  
Sbjct: 278 ATFTVGGMMALEGNLNVGAYGVLVFLTQRLLWPLTGLAEVIDLFERAMASTRRILDLLAE 337

Query: 458 PVEQHTGSDNVT---ISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGK 514
           PV             + G +    + F Y P     I D+SL + AG TL +VG +GSGK
Sbjct: 338 PVHVRDEGGKALAEPVKGDVELDKVSFHY-PSSGAGIQDISLTVPAGNTLALVGATGSGK 396

Query: 515 STLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKP 574
           STL +LLLR Y P  G I IDG P+  +N+Q LR  +G+V Q+ +LF  ++ EN+A   P
Sbjct: 397 STLIKLLLRFYDPSNGQIRIDGQPIRDLNLQSLRGAIGLVSQDVYLFEGTIRENLAYGNP 456

Query: 575 EASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLI 634
            AS  EII+AAK + A  FI  LP G +T + E G  LSGGQRQRL++AR LL +P +L+
Sbjct: 457 AASDTEIIDAAKTAEAWSFIEALPEGLNTPVGERGVRLSGGQRQRLSLARALLKNPPILV 516

Query: 635 LDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQGTIVEQGSHQ 694
           LDEATSA+D+E++A IQ ++  I   RTVI IAHRLST+ D D I V+  G ++EQG+H+
Sbjct: 517 LDEATSAVDNETEAAIQRSLKRIGHNRTVIMIAHRLSTIVDADSIAVIEGGKVLEQGTHR 576

Query: 695 QLLAYGKQYKQLWQLQ 710
           +LL     Y   W++Q
Sbjct: 577 ELLDQDGAYANQWRVQ 592