Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., colicin V synthesis protein from Klebsiella michiganensis M5al

 Score =  281 bits (719), Expect = 8e-80
 Identities = 180/634 (28%), Positives = 312/634 (49%), Gaps = 14/634 (2%)

Query: 60  ELDKIQKEHKVKIRTKISQFKNIESLKTPAILFDQHDLPFITAKTNKDKCLIQRPNKETP 119
           +L K  +   +K R        I  LK P I+    +   +  K  K   ++  P+    
Sbjct: 68  QLSKTAEHAGLKSRALSLDLDEIRQLKLPCIIHWGMNHYVVLTKVRKSSFIVHDPSLGK- 126

Query: 120 EVISSHELNST--------WNKKSLVIQQAQSRFDITWFIPEFLQHKRVLSEILLFSFVL 171
            VI   E+++         W  ++   + A+SR  +   +   +  K VL +I  FS V+
Sbjct: 127 RVIGLQEMSNNFTGIALELWPDQNFDQETAKSRLRLLDLMRNIVGLKSVLLKIFAFSVVV 186

Query: 172 QILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVITGVIEVVLRGLREYQYAHTANRID 231
           + + L+ P+  Q+V D V++    S L V+  GLV   +    +  LR +         +
Sbjct: 187 EAIGLLLPIGTQLVTDHVIMAHDQSLLSVICIGLVFFTLFRTFISMLRAWTSLTLNTLTN 246

Query: 232 IQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTIREFLTGSMFTLTVELLFMFVFLY 291
           IQ    L  HL  LPL FF+ R +G I +R   LDTIR   T S+    ++ +     L 
Sbjct: 247 IQWKTTLFDHLTKLPLSFFEKRHLGDIQSRFSSLDTIRSTFTNSIVGGIIDSIMTIGLLI 306

Query: 292 VMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEKQFSHAAANTSFLTETVAGSETLK 351
           +++L    L  + +    CY ++        +   E+Q    A ++S   E++ G  T+K
Sbjct: 307 MLALYGGWLVWVVVGFTACYAIMRLSTYHFYRRVAEEQVVKGARSSSHFMESLYGISTIK 366

Query: 352 SLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLVQLLQKITSVAILWLGATEVLSLE 411
           +L ++ R  + W          G    + +   + +   +  I  VA+LWLGA  V+  E
Sbjct: 367 ALNLKERRSQHWLNINIDACNAGIKQTRFDMMFSGVNTFISSIDQVAVLWLGAIMVIDNE 426

Query: 412 MTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAIEKLGDMLNLPVEQHTGSDNV--- 468
           MT+G  +AFN      +Q  + +++L+ Q     +  E+L +++    E+   S  V   
Sbjct: 427 MTLGMFMAFNAYRGQFSQRASSLIDLFMQLRMLSLHNERLSEIVFSKPEEELPSRRVFTE 486

Query: 469 TISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPE 528
                +  KN+ ++Y P   P  ++L++ I  GE++ ++G SG GK+TL +++  L SP 
Sbjct: 487 NTGARLEVKNLCYQYDPFSQPIFSNLNITIEPGESIALIGPSGVGKTTLLKVMCGLLSPT 546

Query: 529 QGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLS 588
            G +  D + +  I +   RQ    VLQE+ LF  S+++NI+  +    LE ++E A+  
Sbjct: 547 SGDVLADNLDIQKIGLNNYRQGTACVLQEDRLFSGSLTDNISGFEDNVDLEFVMECARRC 606

Query: 589 GAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIARTLLSDPKVLILDEATSALDDESQA 648
             HD I+K+PMGY+T++ E G  +SGGQ+QR+ IAR L   P +L +DEATS LD ++++
Sbjct: 607 NIHDEIMKMPMGYETIVGELGLGISGGQKQRILIARALYRKPSILFMDEATSHLDLKNES 666

Query: 649 VIQANMASIARGRTVITIAHRLSTVRDCDRIIVL 682
           +I  +++ ++  R +  +AHR ST+   DR+I L
Sbjct: 667 IINQSISGLSITRVI--VAHRPSTIASADRVIDL 698