Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., ABC-type multidrug transport system, ATPase and permease components from Sphingomonas koreensis DSMZ 15582

 Score =  237 bits (605), Expect = 1e-66
 Identities = 126/267 (47%), Positives = 180/267 (67%), Gaps = 4/267 (1%)

Query: 448 IEKLGDMLNLP--VEQHTGSDNVTI-SGAISFKNILFRYQPDIPPTINDLSLDIRAGETL 504
           +E+L D+ + P  ++  T +  + I +G + F ++ FRY     P    L+L IR GE +
Sbjct: 317 MEELVDLHDQPLGIDDRTDAQPIHIGAGEVHFDDVTFRYGGHETPLYEHLTLTIRGGERV 376

Query: 505 GVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKS 564
           G+VG SGSGK+T  +L+ RLY   +G +TIDG  ++H   Q LR ++ +V QE  LFH+S
Sbjct: 377 GLVGHSGSGKTTFVKLIQRLYDVNEGRVTIDGQDVSHATQQSLRAQIAIVQQEPILFHRS 436

Query: 565 VSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIAR 624
           +++NIA ++P AS  E+  AA+L+ AHDFI++LP GY T++ E G  LSGG+RQR+A+AR
Sbjct: 437 LADNIAYARPGASQAEVEAAARLANAHDFIVRLPRGYATLVGERGVKLSGGERQRVALAR 496

Query: 625 TLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQ 684
             L+D  +LILDEATS+LD ES+A+IQ  M  + +GRT I IAHRLSTVR  DRI+V  +
Sbjct: 497 AFLADAPILILDEATSSLDSESEALIQQAMDRLMKGRTAIVIAHRLSTVRTLDRILVFDK 556

Query: 685 GTIVEQGSHQQLLA-YGKQYKQLWQLQ 710
           G I+E G H  LL   G QY++L+  Q
Sbjct: 557 GRIIEDGDHDTLLVNAGGQYRRLFDRQ 583