Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA from Enterobacter sp. TBS_079

 Score =  254 bits (649), Expect = 8e-72
 Identities = 158/513 (30%), Positives = 276/513 (53%), Gaps = 9/513 (1%)

Query: 205 LVITGVIEVVLRGLREYQYAH----TANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVT 260
           LV+ G++  +LRG+  Y  ++     + ++ + +  +L  H+ G+P+ FF  +  G +++
Sbjct: 69  LVVIGLM--ILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLS 126

Query: 261 RVR-ELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLT 319
           R+  + + +    + ++ T+  E   +     +M   S  L+ + I   P   +    ++
Sbjct: 127 RITYDSEQVASSSSNALITVVREGASIIGLFIMMFYYSWQLSLILIVLAPVVSIAIRVVS 186

Query: 320 PRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQ 379
            R +   +   +     T+   + + G + +     +    +R+D+ + KM   G  +  
Sbjct: 187 KRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVS 246

Query: 380 LNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWG 439
            ++ S+ ++QL+  +    +L+  +   +   +T G +         + +PL  +  +  
Sbjct: 247 ASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLTNVNA 306

Query: 440 QFIQTRVAIEKLGDMLNLPVEQHTGSDNVTIS-GAISFKNILFRYQPDIPPTINDLSLDI 498
           QF +   A + L  +L+   E+  G   +  + G + F+N+ F Y     P + +++L I
Sbjct: 307 QFQRGMAACQTLFSILDTEQEKDEGKREIERAHGDVEFRNVTFTYPGRETPALRNINLSI 366

Query: 499 RAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQEN 558
            AG+T+ +VG SGSGKST+A L+ R Y  ++G I +DG  L    +Q LR +V +V Q  
Sbjct: 367 PAGKTVALVGRSGSGKSTIASLITRFYDIDEGEILLDGHDLREYTLQSLRNQVALVSQNV 426

Query: 559 FLFHKSVSENIAQSKPEA-SLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQR 617
            LF+ +V+ NIA ++ E  S  EI +AA+++ A DFI K+  G DT++ E G  LSGGQR
Sbjct: 427 HLFNDTVANNIAYARTEEYSRAEIEKAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQR 486

Query: 618 QRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCD 677
           QR+AIAR LL D  +LILDEATSALD ES+  IQ+ +  + + RT + IAHRLST+   D
Sbjct: 487 QRIAIARALLRDSPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLSTIEQAD 546

Query: 678 RIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
            I+V+  G IVE+GSH  LLA+   Y QL ++Q
Sbjct: 547 EIVVVEDGVIVERGSHSDLLAHRGVYAQLHKMQ 579