Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 776 a.a., ABC transporter, ATP-binding protein/permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  295 bits (754), Expect = 8e-84
 Identities = 172/552 (31%), Positives = 292/552 (52%), Gaps = 4/552 (0%)

Query: 149 WFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTLDVLVFGLVIT 208
           WF    L    +   +LL S V+ +L + SPLFF  V D+V+ + A  TL VL  G+ I 
Sbjct: 197 WFWDTLLHFLPIYRHVLLASVVVNLLTVASPLFFMNVYDRVVPNSATDTLWVLAVGIGIA 256

Query: 209 GVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRELDTI 268
            + + VLR LR Y         D+ L  +L+QHL  + L   K    G++   +RE +++
Sbjct: 257 YICDFVLRNLRSYFVDVAGRNADVVLASRLMQHLMAVRLDN-KPDSTGSLANNLREFESL 315

Query: 269 REFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQAAIEK 328
           REF   +     V+L F+ +FL++++L+   +  L    +P  + +   +    Q   E 
Sbjct: 316 REFFGSTTLLALVDLPFLVLFLFIVALIGGEMIALPAIAIPVVLGVGMLVQYPFQRVAEA 375

Query: 329 QFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNRSNHLV 388
            +  A    + L E + G ET+K+   E R    W++       +    + L N S  + 
Sbjct: 376 GYKEAMQKNALLVEIINGLETVKASMAEGRLQHAWEKVVGMSARSNAHSKGLANLSITVS 435

Query: 389 QLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQTRVAI 448
            L+ ++ SV I+  G  ++    +T+G LIA NM++     PL+++  +  +  Q+R+A+
Sbjct: 436 LLVTQLVSVGIIIWGVYKISDGTLTMGGLIACNMLSARAMAPLSQIAAMLARLQQSRMAL 495

Query: 449 EKLGDMLNLPVEQHTGSDNVT---ISGAISFKNILFRYQPDIPPTINDLSLDIRAGETLG 505
           + L  ++ LPVE+      V    +  ++  +++ F Y       ++ +SL IR GE +G
Sbjct: 496 KSLDILMQLPVERPEDRPYVDFGPLEHSLELESVSFAYPGAERLALDGVSLRIRPGEKVG 555

Query: 506 VVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQENFLFHKSV 565
           V+G  GSGKSTL RL++ LY P  G++   G+ +  +++  LR R+G + Q+N+LF+ ++
Sbjct: 556 VIGKMGSGKSTLGRLMMGLYQPRDGAVKFGGVDIRQMDMADLRGRIGYLSQDNYLFYGTL 615

Query: 566 SENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQRQRLAIART 625
            +NIA   P A    I+ AA ++G  +F    P G+   + E G +LSGGQRQ +A+AR 
Sbjct: 616 RDNIAMGVPNADDRMIMRAADVAGVTEFARNHPAGFGLQVGERGMALSGGQRQAVALARA 675

Query: 626 LLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDCDRIIVLHQG 685
           LL DP VLILDE TS +D  S+   +  + ++   +T++ I HR+S +   DR++V+  G
Sbjct: 676 LLHDPDVLILDEPTSNMDTGSEFAFKQRLRALLGDKTLVLITHRMSVIDLVDRLVVVDGG 735

Query: 686 TIVEQGSHQQLL 697
            IV  G    ++
Sbjct: 736 RIVADGPRDAVI 747