Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 1019 a.a., peptidase C39 from Cupriavidus basilensis FW507-4G11

 Score =  401 bits (1031), Expect = e-116
 Identities = 224/578 (38%), Positives = 333/578 (57%), Gaps = 6/578 (1%)

Query: 139  QQAQSRFDITWFIPEFLQHKRVLSEILLFSFVLQILALISPLFFQVVMDKVLVHQAWSTL 198
            Q A +R     FI     +KR+L+ + + +FV+Q+L ++ PL  Q ++D V+VHQ    L
Sbjct: 438  QLAVARSPWLRFIGYLAPYKRILAHLFMATFVIQVLGVVPPLIIQNILDGVVVHQNMGLL 497

Query: 199  DVLVFGLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAI 258
            ++L+ GL+++ V   ++  +R Y        +D  +     +H   LP  FF  R+ G I
Sbjct: 498  NLLILGLIVSSVFSQLMSSVRAYLANFMVRNMDFAMMSHFFKHTLSLPFSFFAKRKTGDI 557

Query: 259  VTRVRELDTIREFLTGSMFTLTVELLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWL 318
              R +E  TIR FLT S  T  + LL +F++  +M L +  +T + IA V    +L    
Sbjct: 558  FARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFLYNVKMTLVLIAFVIPIAILTIVA 617

Query: 319  TPRMQAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQ 378
            TP+++A   + F+      S+L E + G ET+K + +E     +W+++  K +   Y  Q
Sbjct: 618  TPKVKAFAREVFTTTTDARSYLMEALGGVETVKGMGIERPVRLKWEKKYAKALEVQYRAQ 677

Query: 379  QLNNRSNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELW 438
              +       QLL   T++A+LW+GA  VL  E+T+GQLIAFN     +  PL  +V LW
Sbjct: 678  AFHILVGLASQLLNAATTIAVLWVGANLVLQRELTVGQLIAFNAFMGSVLAPLMGLVALW 737

Query: 439  GQFIQTRVAIEKLGDMLNLPVEQHTG--SDNVTI---SGAISFKNILFRYQ-PDIPPTIN 492
            GQ     VA+E+LGD+L+L  EQ     +  V +    G I+   + FRY   + P  + 
Sbjct: 738  GQLNDAGVAMERLGDVLDLDPEQKPQDLASRVMLPDLQGEINLDGVYFRYGGAETPYVLE 797

Query: 493  DLSLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVG 552
            ++S  I+ GE L +VG SGSGK+TLA++L+  Y P +G IT+DG  L  I+ +  R ++G
Sbjct: 798  NISFSIKPGELLAIVGRSGSGKTTLAKMLVGFYVPTEGKITVDGYDLGVIDKEYYRAQIG 857

Query: 553  VVLQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSL 612
             V+Q N LF  +++ENIA          I E AK++ AH FI KLP+GY+ V+ E G  L
Sbjct: 858  YVMQSNLLFSGTIAENIACGDDSPDRRHIEEVAKMADAHAFISKLPLGYEQVVGERGVGL 917

Query: 613  SGGQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLST 672
            SGGQ QRL IAR L  DP++L+ DEATSALD +S++ I  NM  I +GRT + IAHRLST
Sbjct: 918  SGGQIQRLCIARALYHDPRLLVFDEATSALDTQSESNILGNMQEILQGRTAVIIAHRLST 977

Query: 673  VRDCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
            +   D+I+VL++G IVEQG H++LL     Y QL Q Q
Sbjct: 978  IMRADKILVLYEGAIVEQGRHEELLERKGMYYQLVQKQ 1015