Pairwise Alignments

Query, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein from Caulobacter crescentus NA1000

 Score =  262 bits (670), Expect = 3e-74
 Identities = 166/516 (32%), Positives = 274/516 (53%), Gaps = 12/516 (2%)

Query: 204 GLVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVR 263
           GL    ++  +   LR +       R+   L  KL  H   L   +F   + G +++R+ 
Sbjct: 99  GLGAVALVLALATALRFFFITRLGERVVADLRRKLYGHTLSLDQPYFLKTRTGEVLSRLT 158

Query: 264 ELDTIREFLTGSMFTLTVE-LLFMFVFLYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRM 322
               + E L G+  ++ +  +L +   L  M+++S  L G  +  VP  +   + +  R+
Sbjct: 159 TDVALVEQLVGASISIALRNILNLIGGLTAMAVVSPKLAGFIVLMVPVILAPMFLVGRRV 218

Query: 323 QAAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNN 382
           +          A    +  E++   ET+++   E     R+    E        V+++  
Sbjct: 219 RKLTVTAQDRFADAVGYAGESLDALETVQAFGRESASSGRFGAAVEAAYKAS--VRRITT 276

Query: 383 RSNHLVQLLQKITS--VAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQ 440
           R+     ++         +LW GA  VL+ EMT G L  F M+    A  +  + E+WG 
Sbjct: 277 RATMTAMVITLAFGGITLLLWTGARLVLAGEMTGGTLAQFAMLAVMAAGSIGALGEVWGD 336

Query: 441 FIQTRVAIEKLGDMLNLPVEQHTGSDNVTI----SGAISFKNILFRY--QPDIPPTINDL 494
             +   A++++ ++LN   +        T+     G I+F+N++F Y  +PD+P  +N  
Sbjct: 337 VQKASGAMDRISELLNAKPDIAAPPQPKTLPVPGQGEIAFENVVFAYPGRPDLP-ALNGF 395

Query: 495 SLDIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVV 554
            L ++ GET+ +VG SG+GKST+ RLLLR Y P+ G I +DG+ L      ++R R+ +V
Sbjct: 396 DLRVKPGETVALVGPSGAGKSTVLRLLLRFYDPQSGCILLDGVNLRDAEPAEVRARMALV 455

Query: 555 LQENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSG 614
            Q++ LF  S  +NI   +P+A+ E++  AA  + A  F+  LP G+DT + E  ++LSG
Sbjct: 456 AQDSPLFSGSAMDNIRFGRPDATDEQVRAAADAAQATGFLSALPEGFDTPVGERAKTLSG 515

Query: 615 GQRQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVR 674
           GQRQRLAIAR L+ +  +L+LDEATSALD ES+ ++Q  +A+   GRT + IAHRL+TV 
Sbjct: 516 GQRQRLAIARALVREAPILLLDEATSALDAESEQLVQQALATAMEGRTTLVIAHRLATVL 575

Query: 675 DCDRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710
             DRI+V+ +G +VEQG+H +L A G  Y +L +LQ
Sbjct: 576 KADRIVVMEEGRVVEQGAHAELFAKGGLYARLARLQ 611