Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., ABC exporter for hemopore HasA, membrane fusion protein (MFP) family component HasE from Pseudomonas fluorescens FW300-N2E2

 Score = 99.0 bits (245), Expect = 3e-25
 Identities = 111/433 (25%), Positives = 194/433 (44%), Gaps = 44/433 (10%)

Query: 59  LTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKG 118
           L L+LG    LLWA    LD     +G +VV+G  + +QS     +  + V DG RV +G
Sbjct: 42  LVLTLG--GFLLWACLAPLDQGVVGSGTVVVAGERKAVQSLVGGVVEKLLVSDGDRVTQG 99

Query: 119 APLLTLDTLGVNQ--DIT--RLVS----QAEFQTNELIRYRTLLNDQLLTH--DPMFTAL 168
             L+ L+T+      D+T  +L++    +A      L         +LL H  +P   A 
Sbjct: 100 QLLVQLNTVQAQSQLDVTLGKLLNDRSIEARLIAERLGNAEIQWPAELLAHADEPRVKAA 159

Query: 169 PAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENI-SQRLA 227
            A Q  L    +++ + E  S L  I  E        AA Q  +     +  N  +Q   
Sbjct: 160 MALQSQL----FITRRAELGSRLQIIEHE-------AAALQQQLLGYEGVKRNYDAQMRF 208

Query: 228 ARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAEL-----EVLKSQYESLEERLTGFK 282
            +++L  ++ +    Y+ + K L EA+R  AQ   ++     +V +++    E RL   +
Sbjct: 209 QQQELEGLRDLAREGYVPRNK-LFEAERNAAQLAGQIASGVGDVGRTRQAINESRLKALQ 267

Query: 283 AQKQREWLEKRRQARLQLASLNQELSKVRER---EQLEI----IRSPVDGTVQQLSVYTL 335
           AQ+     E RR A  QL+ ++ E +   ++    Q E+    IR+PV G V  +S++T+
Sbjct: 268 AQQ-----EFRRDAETQLSEVSAEAAGYADQIRALQFEVDNGAIRAPVAGQVMDVSIHTV 322

Query: 336 GAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELL 395
           G V Q  Q LM +VP +       +        + PG  V V   A       T+   + 
Sbjct: 323 GGVAQAGQTLMQVVPLDAPMAITARFEPLMANKLRPGLPVHVHFTALQRVDTPTVTGTVT 382

Query: 396 SISRDSTTDEQLGL-VFPAQIQLKTNHIM-IDGQTVELTPGMSVVAEIKTDKRRVIDYLL 453
           ++S D   +EQ     F A++++  + ++ +    + + PGM     + T +R +++YL+
Sbjct: 383 TVSADQLINEQTHQPYFSAKVEIPADTVVELQSAGLLIRPGMLADVTVVTGERTLMNYLM 442

Query: 454 SPIQEYQAEALRE 466
            P++E    A +E
Sbjct: 443 KPLRERLLAAFKE 455