Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE from Pseudomonas fluorescens FW300-N2E2

 Score =  107 bits (267), Expect = 8e-28
 Identities = 108/427 (25%), Positives = 188/427 (44%), Gaps = 21/427 (4%)

Query: 53  FARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDG 112
           F RV      +G  +   WA    LD      G +VVSG+ + +QS     +  I VR+G
Sbjct: 19  FTRVGWALALVGAGSFFTWASLAPLDQGIPVQGTVVVSGKRKAVQSMSSGVVSRILVREG 78

Query: 113 QRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPM-FTALPAE 171
           + V++G PL  LD      D+  L +Q       L R+++  ++ L    P   +  P  
Sbjct: 79  EAVKQGQPLFRLDQTQAAADVQSLQAQYRMTWASLARWQSERDNLLQVSFPAELSRDPDP 138

Query: 172 QQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDI-HALLQLTENISQRLAARK 230
           + AL+ E      +      A   A ++ N    AA+ + +  A   LT   +Q  + R 
Sbjct: 139 RLALVLEGQRQLFSSRREAFAREQAALRANIEGAAAQLAGMRRARSDLT---AQAESLRL 195

Query: 231 KLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWL 290
           +L  ++ +    Y+ + + LL+ QRQ++Q + EL     +   +E+ +   + + Q+   
Sbjct: 196 QLGNLQPLADNGYIPRNR-LLDYQRQLSQVQQELAQNSGESGRVEQGIVESRLKLQQHNE 254

Query: 291 EKRRQARLQLA-------SLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQ 343
           E +++ R QLA       +L ++L       Q   I +  DG    L V+T GAV++   
Sbjct: 255 EYQKEVRSQLADAQLKSETLQEQLKSAGFELQHSEILATADGIAVNLGVHTEGAVVRQGD 314

Query: 344 NLMIIVPENRVQQAE----VQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISR 399
            L+ IVP+    + E    V +++K VG   P   V +   AF   R   +  E+  IS 
Sbjct: 315 TLLEIVPQGTRLEVEGHLPVHLIDK-VGAHLP---VDILFTAFNQNRTPRVPGEVSLISA 370

Query: 400 DSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEY 459
           D   DE+ G  +       ++  M     + + PGM     ++T +R +++YL  P+ + 
Sbjct: 371 DQMLDEKTGAPYYVLRSSVSDVAMDKLNGLVIKPGMPAEMFVRTGERSLLNYLFKPLLDR 430

Query: 460 QAEALRE 466
              AL E
Sbjct: 431 AGSALTE 437