Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., RTX toxin transporter, determinant D from Xanthomonas campestris pv. campestris strain 8004

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 85/384 (22%), Positives = 163/384 (42%), Gaps = 41/384 (10%)

Query: 84  TGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQ 143
           +G+++ +     I+S     +LS  ++    V+KG  L  L    +  +  R +S    +
Sbjct: 69  SGQIISTHGRVDIRSGTPGLILSTTLKPNALVKKGQVLAELSA-DITDEAGRSLSDETIK 127

Query: 144 TNELIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRT 203
              L R   L  +QL THD  F+     +     E       E    ++ +  +   N+ 
Sbjct: 128 -RALTRSEELTKEQLQTHD--FSGQRERELTRQVEETTGAMQEVARKISILEKKYAKNK- 183

Query: 204 SQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263
                        +L + I   LA        K +    YL  E  LL+A+ ++   RA+
Sbjct: 184 -------------ELLKTIEPLLAE-------KYVSKYTYLTYENALLDAEAEIQDARAQ 223

Query: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPV 323
              L++Q  +L   +T  K    R+  E  R+     +++  ++++ +  ++L+ I SP+
Sbjct: 224 QSTLRNQRAALLGEITEIKTTASRQASEIEREK----STIEDQVARAKS-DRLQTITSPL 278

Query: 324 DGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFP 383
            GTV  +   + G  +     +  I P   V +AE+ I ++ +G V  G  V + + AFP
Sbjct: 279 SGTVAAIYA-SQGQRIGTDSIIASITPSESVFEAEILIPSRAIGHVNVGTEVLLNIAAFP 337

Query: 384 YTRYGTIDAELLSISRDSTTDEQLGL----------VFPAQIQLKTNHIMIDGQTVELTP 433
             +YG I   + S+S  ++   +L            V+ A++ L +  I +  +     P
Sbjct: 338 KAKYGAIQGRIASLSTQTSPIGELERRYGRQSPTEPVYTAKVALPSQTIGVAQEAKSFLP 397

Query: 434 GMSVVAEIKTDKRRVIDYLLSPIQ 457
           GM V AE+  + R++ +++  P Q
Sbjct: 398 GMEVDAELILEGRKIWEWMFDPFQ 421