Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., hemolysin secretion protein-like from Synechococcus elongatus PCC 7942

 Score =  128 bits (322), Expect = 3e-34
 Identities = 101/415 (24%), Positives = 198/415 (47%), Gaps = 14/415 (3%)

Query: 53  FARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDG 112
           ++R+T  TL     +A  WA   ++D      G+L      + +Q+     L  + V++G
Sbjct: 36  WSRLTIWTLVGVTASATAWACIAQIDEAVQVQGQLEPKAAVKDVQAPVGGVLERLEVKEG 95

Query: 113 QRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFTALPAEQ 172
           QRV +G  L   +   V + I  L    E    E   +R  + +          ++   Q
Sbjct: 96  QRVTQGQILARFNATTVAERIRSLTEIRERLVAENQTFRAQIGES------SEGSVSVNQ 149

Query: 173 QALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAARKKL 232
           Q  I     + + EF+S   +   E    +  Q   +S++  +    +   + L   + L
Sbjct: 150 QQRIE----AARREFESRQEAARLEASQLKQQQLQVESELQQVRYSLDLNQRILNDLRPL 205

Query: 233 NQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEK 292
            +   I   +YL+QE+ + + +  + + +AEL+ L+      E RLT  +     E   +
Sbjct: 206 YEEGGIARTQYLKQEETVSQLESTLRKNQAELQRLQFAVSQAEARLTNTQTVTFSEARGR 265

Query: 293 RRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPEN 352
             +   ++A ++ ++++ ++  + +I+R+P  GTV  ++    G V   ++ LM +VP++
Sbjct: 266 IEENARRIAEIDSQITEAKQTLKYQIVRAPQSGTVFDITAQGPGYVANTSEPLMKLVPDD 325

Query: 353 RVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDS--TTDEQLGLV 410
            +  A + I NKD+GFV  GQ V +++D++P++ YG +  +L  +  DS    D    + 
Sbjct: 326 EL-VARLYIPNKDIGFVRTGQDVDIRIDSYPFSEYGDLKGKLTRVGSDSLPPNDTYQYVR 384

Query: 411 FPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAEALR 465
           FPA++ L+   ++  G+ + +  GMSV A I+  +R VI  LLS +    ++AL+
Sbjct: 385 FPAEVTLQEQKLVSRGRELPIQSGMSVSASIRLRQRPVIT-LLSDLFSRSSDALK 438