Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

 Score = 84.3 bits (207), Expect = 9e-21
 Identities = 92/430 (21%), Positives = 195/430 (45%), Gaps = 60/430 (13%)

Query: 37  EFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVI 96
           EFLP        P + + ++  ++L LG +  ++   + K  V   A   +   G ++++
Sbjct: 177 EFLP--------PVNHWFQIAGISLVLGFIGTIILTSFLKYKVVVKAPALIRPIGETRLV 228

Query: 97  QSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLND 156
           Q+  + ++  I VR  Q V++G P++ +D    +Q IT+               R  L D
Sbjct: 229 QAAVEGKVRQIAVRSNQEVQQGDPIIVIDD---SQQITK---------------RDQLID 270

Query: 157 QLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALL 216
            +  +      + + Q+A I E  L+E N+    +    A+++    + A   +D ++  
Sbjct: 271 SIAKNQLKLQQIES-QKAAIAEEMLAESNKVARGIDVNQADIQTAEANLALA-ADEYSRY 328

Query: 217 QLTENISQ--RLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESL 274
           Q   N      L  ++KL   +V         +  L  A+   AQ   +    +++   +
Sbjct: 329 QTLSNAGAIADLLVQEKLASFRVA--------QANLSRARELTAQTEEQGLATQARLRQM 380

Query: 275 EERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYT 334
           +++L    AQ++ E L++ +  + +L  +N  L+         ++R+P+ G +Q +++  
Sbjct: 381 QDQL----AQQESETLQQIKVEQKELQQMNINLANT-------VVRAPISGIIQSINLRN 429

Query: 335 LGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAEL 394
              V+   Q +  I P       +  + ++++  V  GQ V +++ A PY  +GT+D ++
Sbjct: 430 PDQVVGVGQEVARIFPTQSGLTIKALVPSQNILPVALGQRVQLRIAACPYPDFGTLDGKV 489

Query: 395 LSISRDS--------TTDEQLGLVFPA-QIQLK-TNHIMIDGQTV-ELTPGMSVVAEIKT 443
            +I+ DS         T+E +     A ++ +K  +  + DGQ V ++ PGM   A+I T
Sbjct: 490 QAIAPDSGGSSSSAAQTNEPVAANSQAYEVTIKPEDRSLTDGQRVCKIRPGMDAEADIIT 549

Query: 444 DKRRVIDYLL 453
           ++  V+ ++L
Sbjct: 550 NEETVLKFML 559