Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., transporter from Sinorhizobium meliloti 1021

 Score = 85.1 bits (209), Expect = 4e-21
 Identities = 90/412 (21%), Positives = 179/412 (43%), Gaps = 23/412 (5%)

Query: 71  WAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVN 130
           WA+   L     A G  V +G ++++Q  E   +  + V +G +V+ G  L+ LD   V 
Sbjct: 45  WAFAAPLAAAIIAQGSFVANGNNKIVQHLEGGIIEELLVAEGDKVKAGDILVKLDQT-VA 103

Query: 131 QDITRLVSQAEFQTNELI-RYRTLLNDQLLTHDPMFTALPAEQ---QALIHE---NYLSE 183
           +   R+++    +   ++ R R     +     P   A  A+    +A++     N+ S+
Sbjct: 104 RANARMLNLKRLRLEAVVGRLRAEAVGEDAFSVPQIVARQADDPDVRAIMESQNVNFQSK 163

Query: 184 KNEFDSTLASITAEMK---VNRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGH 240
           K +    L  I   ++         A +Q+  +  L++   +++   A+ KL    +I  
Sbjct: 164 KIKLRDQLNLIDQNIRSLEFRARGYALQQASFNRQLEI---LNEEREAKSKLADKGLIRR 220

Query: 241 VEYLEQEKELLEAQRQVAQQRAELEVLKSQYESL-EERLTGFKAQKQREWLEKRRQARLQ 299
            E +  ++ + +A  ++ +  +E++   +Q +   +E +      KQ   L+    A   
Sbjct: 221 PELMALDRAIADAIGEIGRLESEVKESYTQIDRYRQEAVIAVNTNKQAA-LDGLEAAEAD 279

Query: 300 LASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEV 359
           L  + +++ +  E      IRSPVDGTV +   +T G V+   + +M I+P N     E 
Sbjct: 280 LDGVREQVREASEVLGRATIRSPVDGTVVRSYFHTAGGVIASGKPIMEILPANVPLIIEA 339

Query: 360 QILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQLG----LVFPAQI 415
           Q+L   +  +  G+  T+++ A        +  ++  +S DS  +E  G     V+  ++
Sbjct: 340 QLLRTAIDQLKVGEDATIRLSALNRRTTPVLKGKVFYVSADSIEEEVAGGQQRDVYIVRV 399

Query: 416 QLKTNHI-MIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAEALRE 466
           ++  + I  I G      PGM     I T +R   +YL  PI +  + A +E
Sbjct: 400 EVPASEIGRIHG--FHPVPGMPAEVLITTSERTFFEYLTKPITDSMSRAFKE 449