Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., toxin secretion transmembrane protein from Sinorhizobium meliloti 1021

 Score =  169 bits (428), Expect = 2e-46
 Identities = 120/437 (27%), Positives = 209/437 (47%), Gaps = 13/437 (2%)

Query: 44  ALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSR 103
           A+ +RP SP  R+T   L  G++A  +  YW K+++ A   G+++   R Q++Q     R
Sbjct: 4   AVIERPVSPTVRLTTWVLISGLVAIFVGGYWLKIEIVARGQGKVIPVSRVQLVQPQTNGR 63

Query: 104 LLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTL---LNDQLLT 160
           ++ I V +GQ V+ G  L+ +DT+ V   I   +++   Q       R +   L +  + 
Sbjct: 64  IIRILVTEGQPVKAGDLLVGMDTVSVESQIKLRLTEVRRQRRGATVARVIIAALTNVAVA 123

Query: 161 HDPMFTALPAEQQALIHENYLSEKNE--FDSTLASITAEM-KVNRTSQAARQSDI--HAL 215
           +D +  A  A  +   H+  + +  E   ++ L S+  ++ ++N       QS I   A 
Sbjct: 124 NDDVLAAGRAAFERERHDLEVIDGAEALIEAVLTSLRDQVARINAQLDRVEQSRITQQAR 183

Query: 216 LQLTEN----ISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQY 271
           LQ   +     S++  +  KL     I  V+Y E+ +E    + +V    +EL +L ++ 
Sbjct: 184 LQKARSDLDISSRKFLSAGKLKDKGAISEVDYFERLREQRARELEVLISESELNILAAEA 243

Query: 272 ESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLS 331
            +L  +     +     + ++  +A   LA L  ELS  R +  L  IR+P DG V+ L+
Sbjct: 244 NALARQRQSIISTAVENYQKQLNEASTSLAGLEAELSAARNQLALLAIRAPADGKVENLT 303

Query: 332 VYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTID 391
           V+T+G  ++    LM IVP     + E    N+D+GF+  GQ   VK DAFP  R+G + 
Sbjct: 304 VFTIGGFVEAGSTLMSIVPSGDGMEIEAFFDNRDIGFLAKGQEAFVKFDAFPAERFGIVR 363

Query: 392 AELLSISRDSTTDEQLG-LVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVID 450
             +  +  D+  D   G  V+   + L    I I G+ +  +PGM+   ++ T +RR+I 
Sbjct: 364 GRVTRVGADARGDIVPGKWVYAIHLVLDQETIGIGGRDIGFSPGMTATIDVITGERRLIS 423

Query: 451 YLLSPIQEYQAEALRER 467
           Y   PI +   + L ER
Sbjct: 424 YFFEPIIKAIQDGLGER 440