Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 435 a.a., type I secretion membrane fusion protein from Phaeobacter inhibens DSM 17395

 Score = 92.4 bits (228), Expect = 3e-23
 Identities = 100/430 (23%), Positives = 184/430 (42%), Gaps = 38/430 (8%)

Query: 61  LSLGVLAALL--WAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKG 118
           L++G+L   L  WA   ++     A+G + V    QV+Q      +  + V +G  VE+ 
Sbjct: 19  LAMGLLVGGLGQWAATAEISGAVIASGSIKVEQNRQVVQHPYGGVVDEVLVSEGDLVEED 78

Query: 119 APLLTLDT---LGVNQDITRLVSQ---------AEFQTNELIRYRTLLNDQLLTHDPMFT 166
           A LL L+    L   Q +   +++         AE    E + +  LL +   TH     
Sbjct: 79  ALLLRLEPSELLAERQIVEGQLAETLARRSRYSAERDEAEEVTFAELLFELSGTH----- 133

Query: 167 ALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRL 226
               + + LI+     +K  F++ L ++ A +   +      QS I  +      + ++L
Sbjct: 134 ---VQTEELIN----GQKRLFEARLVNLRARISRLQERVGQIQSQIDGIEAQQSALQEQL 186

Query: 227 A--ARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQ 284
               ++  NQ  ++   + L Q   +L  QR+ ++ R +   L +Q    E ++T    +
Sbjct: 187 VLIGKELENQQSLLS--QGLAQSSRVLSLQREQSRLRGQAGALTAQKAQAEGQVTELGLE 244

Query: 285 KQREWLEKRRQARLQLASLNQELSKVREREQLEI-------IRSPVDGTVQQLSVYTLGA 337
              +   +R +A   L  L     ++ ER  + +       +R+P+ G V  L+V+   +
Sbjct: 245 ILNQTSARREEAITTLRDLQVRELELIERRNVILQRLSRLDVRAPMAGVVYDLNVFARKS 304

Query: 338 VLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSI 397
           V++ A  LM ++P+++      Q+   D+  VY  Q V++   +F      T+   + ++
Sbjct: 305 VIRAADPLMYLIPQSQPLVISAQVAPSDIDQVYLNQPVSLNFSSFNQRTTPTLFGTVSTV 364

Query: 398 SRDSTTDEQLG-LVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPI 456
           S DS  D Q G   +  + +L    I    +   L PGM V   I+T+ R    YLL P 
Sbjct: 365 SADSFVDPQTGRSYYVVEARLNKGEIDRLPEGNVLVPGMPVETFIQTNSRTPFAYLLQPF 424

Query: 457 QEYQAEALRE 466
            +Y   A RE
Sbjct: 425 TDYLNRAFRE 434