Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 467 a.a., putative type I secretion membrane fusion protein from Phaeobacter inhibens DSM 17395

 Score =  104 bits (260), Expect = 5e-27
 Identities = 103/447 (23%), Positives = 190/447 (42%), Gaps = 24/447 (5%)

Query: 37  EFLPAHLALAQRPPSPFARVTA--LTLSLGVLAALL-WAYWGKLDVQATATGRLVVSGRS 93
           + +P   AL + PP+   ++    L    G+   L+ WA   ++     A G+  V+G  
Sbjct: 25  DLMPDGFALPRTPPTRVRQLVMWMLVCGFGLFGGLVFWATKAEMTSAVVAPGQFTVAGDR 84

Query: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTL 153
             +Q  E   +  I+V +G  V +G  +  LD   +      L SQ       L+  +  
Sbjct: 85  LSVQHLEGGIVREINVAEGDMVAEGDVIAVLDGRRMRASRAILTSQMA----SLLAQQAR 140

Query: 154 LNDQLLTHDPMFTALPAEQQALIHEN------YLSEKNEFDSTLASITAEMKV--NRTSQ 205
           L  +L   D +   +PAE   LI E+      +  +++ F S  A    ++++  +R SQ
Sbjct: 141 LQAELAEADQI--EVPAELDQLIAEDPQLVSLFEVQRDVFTSNRALYEGQVQILRDRISQ 198

Query: 206 AA-----RQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQ 260
                  RQ+ I A+      I   +A   KL +  ++      +++ +           
Sbjct: 199 LGKQLNGRQARITAIEDQLTLIKGEVADLHKLYEKGLVPKTRLSDRQLQHTGLMGTFGAL 258

Query: 261 RAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIR 320
            ++ E L+ +    EER+             + +  + ++  L Q L    +  + + I 
Sbjct: 259 ESDSENLQERIAETEERILQVHRDTVNRISSETQLVQERILDLRQRLDAAEDVLERQTIL 318

Query: 321 SPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVD 380
           +P  G V +LS+ TLG VL P QN++ +VP       E ++   D+  V  G    V++ 
Sbjct: 319 APRAGRVVELSINTLGQVLNPGQNVLELVPSGSDLIVETRVSPTDIDEVVTGGQARVQLT 378

Query: 381 AFPYTRYGTIDAELLSISRDSTTDEQLGL-VFPAQIQLKTNHIMIDGQTVELTPGMSVVA 439
           A+ +     +  E++ ++ DS  D   G+  +   I++    +      V+  PGM   A
Sbjct: 379 AYSFRSTPPVRGEVVMVAADSIADLNSGIPYYRVHIRIPPEELAA-LPNVKTLPGMPAQA 437

Query: 440 EIKTDKRRVIDYLLSPIQEYQAEALRE 466
            I+T ++ + DYLLSP+    + ALRE
Sbjct: 438 MIETGRQTLADYLLSPVLRSMSNALRE 464