Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 438 a.a., putative HlyD family secretion protein from Phaeobacter inhibens DSM 17395

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 100/421 (23%), Positives = 178/421 (42%), Gaps = 42/421 (9%)

Query: 71  WAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVN 130
           W+    +     A+GR+ V    QV+Q  +   +  I V +G  V +GA LL LD   + 
Sbjct: 34  WSVATSIAGAVVASGRIEVDRNRQVVQHLDGGIVQEILVEEGDTVAEGAVLLRLDAKELR 93

Query: 131 QDITRLVSQ------------AEFQTNELIRYRTLLNDQLLTHDPMFTALPAEQQALIH- 177
             +     Q            AE  + E + + T L+D   T  P    L   Q  L   
Sbjct: 94  SQLVITEGQLFELMARRARLDAERDSAETVEFDTELHDLSETR-PEVADLMQGQVRLFEA 152

Query: 178 --ENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAARKKLNQV 235
             ++   E ++ +     I  ++   R  QA+R++ +  + +  E  +Q+    + L Q 
Sbjct: 153 RKDSVAREIDQLEKRRTQIQDQIIGVRAQQASRRTQLDLIEE--ELTNQQSLLDRGLAQA 210

Query: 236 KVIGHVEYLEQEKE-------LLEAQRQVAQQRAELEVLKSQYESLEERLTGFK--AQKQ 286
             + ++   E + +         EAQ +      ++E+LK   +  EE +T  +    ++
Sbjct: 211 GTVLNLRRTEADLQGSLGELIATEAQAEGRITEIDIEILKLGTQQREEAITRLRDLRYQE 270

Query: 287 REWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLM 346
            E  E RR  + +LA L+              I +PV G V  L V+T  +V++ A  ++
Sbjct: 271 LELAETRRALKDRLARLD--------------ITAPVSGIVYGLQVHTPRSVIRAADPVL 316

Query: 347 IIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQ 406
            +VP++R      Q+   DV  ++ GQ+VT++  A        +   +  IS D+  D+ 
Sbjct: 317 YLVPQDRPLVIAAQVAPTDVDQIFVGQAVTLRFPALDQRSTPELFGSVKQISADAFEDQA 376

Query: 407 LGL-VFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAEALR 465
             L  +  +I+L    +    +   L PGM V   I+T  R  + YL+ P+ +Y   A R
Sbjct: 377 SKLSYYRTEIELNPGQLETLPEGTVLIPGMPVEGYIRTADRTPLGYLVKPLADYFVRAFR 436

Query: 466 E 466
           E
Sbjct: 437 E 437