Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., type I secretion membrane fusion protein, HlyD family from Phaeobacter inhibens DSM 17395

 Score =  128 bits (321), Expect = 4e-34
 Identities = 101/403 (25%), Positives = 181/403 (44%), Gaps = 49/403 (12%)

Query: 69  LLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLG 128
           LLWA +  +D    A G +V S RSQ++Q+ E   L  +HV  G  V+ G  L  L    
Sbjct: 30  LLWASFAWVDEIVRADGEVVSSSRSQIVQNLEGGILAELHVHQGDVVKAGQILARLQDTK 89

Query: 129 VNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFD 188
                  L  Q      E+ +YR                L AE +     N   E    D
Sbjct: 90  FRAAADDL--QDRIDALEIKQYR----------------LEAELEGAFDFNVPEELA--D 129

Query: 189 STLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEK 248
            +    T+E  +    Q    S   +  ++ + +   LA  K+L++ +++  +E    +K
Sbjct: 130 RSPGIYTSERALLNARQTDFTSRRDSAREILDQLKDELANMKRLHKKEIVALIEVNRSQK 189

Query: 249 ELLEAQRQVAQ--QRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQE 306
            + +AQ +  +   ++ELE+ +   ++L E                       L S  QE
Sbjct: 190 SVSDAQAKYNEIGTQSELELAEDYSKTLRE-----------------------LTSYRQE 226

Query: 307 LSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDV 366
           L   +++    +I SP+ G V  L+V T+G V++P + ++ I+P       E ++  +++
Sbjct: 227 LRLAQDQLNRTVITSPMAGIVNSLAVTTIGGVIRPGEEIVEIIPLGEEMFVEARVKPENI 286

Query: 367 GFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQLGLVFP---AQIQLKTNHIM 423
             V PGQ  T+K+ A+ YT YG++  ++  +S D+  DE+     P     +++  +   
Sbjct: 287 ASVQPGQDATIKLSAYDYTIYGSLRGKVDFVSADTFEDERNPRAEPYYRVTVKVDRSEFT 346

Query: 424 IDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAEALRE 466
              Q +E+ PGM   AE++T  + +++Y+L P+ +   EALRE
Sbjct: 347 ERQQAIEIRPGMRATAELQTGSKTILNYMLKPLYK-SREALRE 388