Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., hypothetical protein from Pedobacter sp. GW460-11-11-14-LB5

 Score = 80.9 bits (198), Expect = 8e-20
 Identities = 92/372 (24%), Positives = 159/372 (42%), Gaps = 27/372 (7%)

Query: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTL 153
           + I + E  ++  + V++G  V KG PL  ++++  + D+ +   Q     +ELI  +++
Sbjct: 71  KAIYTKEGGKITELLVKEGAYVNKGEPLAFIESVAAHNDVLKFNRQLHLLNDELIAKKSI 130

Query: 154 LNDQLLTHDPM-FTALPAEQQALIHE--NYLSEKNEFDSTLASITAEMKVNRTSQAARQS 210
              Q +  D +    L A  Q    +   Y+S +N    +      E  +    +   Q 
Sbjct: 131 ---QEVNFDQLNLGELQAAYQVFYEQYLKYISAQNGGYYSNKKRYLEKDLIEIDKMKSQI 187

Query: 211 DIHALLQLTE--NISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLK 268
            +   +Q  E  N  +   A KKL Q  VI + EY +QE + L ++  + Q  A +   K
Sbjct: 188 LVQRKIQEKEFANTEEEFFAYKKLFQKGVISNNEYKQQENKYLASKYPLQQSEASILNNK 247

Query: 269 SQYESLEERLTGFKAQKQREWLEKR---RQARLQ-LASLNQELSKVREREQLEIIRSPVD 324
           S             A K++E LE     +  RL+ L SL   LS+        I+++P++
Sbjct: 248 S-----------LNANKRKEILELEHIIQDERLKFLQSLGIILSETEAWVNKFIVKAPIN 296

Query: 325 GTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPY 384
           G +    +      +   Q + II P +     EV I   ++G V  GQ   VK+ +FP+
Sbjct: 297 GKLSYAGILQENQTVNVNQEIFIINPLSADFFGEVYIPQFNMGKVKVGQRALVKMRSFPF 356

Query: 385 TRYGTIDAELLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTD 444
            +YG I A++  IS  +  D     VF A+I  +          + L  GM    EI T+
Sbjct: 357 EQYGLIRAKVSYISDVAIKDS----VFLAKIDFERIENKEAEYKISLKNGMQADVEIVTE 412

Query: 445 KRRVIDYLLSPI 456
           +  ++   L  I
Sbjct: 413 ESSLLKRFLRNI 424