Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., type I secretion membrane fusion protein, HlyD family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  181 bits (458), Expect = 6e-50
 Identities = 125/454 (27%), Positives = 225/454 (49%), Gaps = 20/454 (4%)

Query: 24  GQKSPHQPTEHHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATA 83
           G    H       EF+    A   R   P A + + +L   +L  ++WA +  LD     
Sbjct: 23  GNGGAHGVRRDDLEFMSEVDAALHRKGHPLAFLLSASLGAFLLVFIVWAAFASLDEVTRG 82

Query: 84  TGRLVVSGRSQVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQ 143
             +++ S R Q IQ+ E   +  I VR+GQ VEKG  L+ LD    N+        A  +
Sbjct: 83  QAQVIPSQRIQEIQNLEGGIISEIFVREGQIVEKGTVLVRLD----NESAASFFRDAVSK 138

Query: 144 TNELIRYRTLLNDQLLTHDPMFTALPAEQ-------QALIHENYLSEKNEFDSTLASITA 196
           + E +     L  ++   DP++     ++       Q  IH    + K + +  L+ + +
Sbjct: 139 SYEHMAAIARLEGEMAGKDPVYPPEVVQKAPQVVADQTSIHN---ARKRQLELELSVLES 195

Query: 197 EMKVNRTS---QAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEA 253
           ++   R        RQ  + A L++ +   QR  AR  L + ++   V+YL  E+ +++ 
Sbjct: 196 QLSQKRQEVDEMVGRQGQLGASLRVAQE--QRDIARP-LVEKQIYSKVDYLSLEQRVIQL 252

Query: 254 QRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVRER 313
           +  ++     +   +S    +E+RL+  KA+ + + +E+  + R++L SL + LS   +R
Sbjct: 253 RGDISSLAVNIPKARSAVHEVEQRLSHRKAEVRSQAVEEINKRRVELNSLRETLSAGEDR 312

Query: 314 EQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQ 373
                +R+PV GTV+++ + T G V++P ++++ +VP +     E +I   D+ F++PGQ
Sbjct: 313 VTRTDLRAPVRGTVKRIIINTQGGVVKPGESILELVPLDDTLLVEARIRPADIAFLHPGQ 372

Query: 374 SVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTP 433
              VKV A+ ++ YG ++A L  IS D+  D +    +  +++ K N I   G+ + + P
Sbjct: 373 KAIVKVTAYDFSIYGGLEAGLEQISADTIEDRKGEFYYLVKLRTKKNAITYRGENLPIMP 432

Query: 434 GMSVVAEIKTDKRRVIDYLLSPIQEYQAEALRER 467
           GM+   +I T K+ V+DYLL PI + Q  ALRER
Sbjct: 433 GMTATVDILTGKKTVLDYLLKPILKAQQNALRER 466