Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 428 a.a., secretion protein HlyD from Klebsiella michiganensis M5al

 Score = 67.8 bits (164), Expect = 7e-16
 Identities = 80/425 (18%), Positives = 185/425 (43%), Gaps = 58/425 (13%)

Query: 50  PSPFARVTALTLSLGVLAALLWA-YWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIH 108
           P+    + +L   + ++A +++  +  ++DV+    G ++    S  + S +Q  +++ +
Sbjct: 29  PAWLVTLLSLIFLIALVATIIFCKFTQRIDVR----GEVITLPHSINVFSPQQGFVVTQY 84

Query: 109 VRDGQRVEKGAPLLTLDTLGVNQDITR-LVSQAEFQTNELIRYRTLLNDQLLTHDPMFTA 167
           V+ G+ V+KG PL  LD   V+++ T   VS+++ ++         +N++++  + +   
Sbjct: 85  VKVGEIVKKGQPLYELD---VSRNTTSGNVSESQIES---------INEKIINANDIIKK 132

Query: 168 LPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLA 227
           L   +   +        N  DS + ++   +K      A  Q+ +  + +   N  + L 
Sbjct: 133 LKKNKDETL--------NALDSQIKNVKDSLKETNHMLANTQAGLRKMYENLSNYDKYLK 184

Query: 228 ARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQR 287
                       H  Y               QQ++  + L SQ   L+ ++T   + +  
Sbjct: 185 NGLITKDQYNYQHSLYF--------------QQQSNYQSLISQQMQLDTQVTQINSDRVT 230

Query: 288 EWLEKRRQARLQLASLNQELSKVREREQLE--IIRSPVDGTVQQLSVYTLGAVLQPAQNL 345
           +  +   Q   Q   +N   +++ E       +I++  +G V+ L+V T G +++   +L
Sbjct: 231 KAADFDNQISNQYNQINDYKNQLIESNASGNVVIKATANGKVESLAV-TKGQMVENGSSL 289

Query: 346 MIIVPENRVQQAEVQIL-NKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISR----- 399
             I P   V+   +  L N  + ++ PG ++ ++ DAFP  ++G    ++LSIS      
Sbjct: 290 AQIKPTGDVEYYLILWLPNNSIPYIKPGDTINIRYDAFPADKFGQFPGKVLSISSMPASR 349

Query: 400 ---------DSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVID 450
                     + T++Q   ++ A + +K       G+T+ L+ G+   A +  ++R +  
Sbjct: 350 QELSEYTNVSNGTNQQELALYKAIVTIKHKSFNYKGKTLTLSNGLKAQAVVFLEERPLYM 409

Query: 451 YLLSP 455
           ++ +P
Sbjct: 410 WMFTP 414