Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., Type I secretion system membrane fusion protein PrsE from Enterobacter sp. TBS_079

 Score =  137 bits (346), Expect = 5e-37
 Identities = 119/425 (28%), Positives = 190/425 (44%), Gaps = 63/425 (14%)

Query: 55  RVTALTLSLGVLAALL--WAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIHVRDG 112
           R T +  SL  L A+   WA    LD   T +G+++ S   QVIQS E   + S+ VR+G
Sbjct: 18  RSTWVAWSLFALLAVFITWASLFSLDEVTTGSGKVIPSSHEQVIQSLEGGIIHSLLVREG 77

Query: 113 QRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFTALPAEQ 172
             VE+G  L  LD       +    S+         R +  +ND  L       A PAE 
Sbjct: 78  DIVERGQQLAQLDRTKTESSVLESESRLNAALATASRLKAEVNDTAL-------AFPAE- 129

Query: 173 QALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAARKKL 232
                          D  +  +  E  + ++ + + +  +  L Q  E + + L+  + L
Sbjct: 130 --------------LDDDVELVKQETALYQSRRESLEKGLAGLRQGAELVQRELSLTRPL 175

Query: 233 NQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQREWLEK 292
                   VE L  E++  E + ++ +       +K+QY                     
Sbjct: 176 VTQGAASKVEVLRLERQKNELENKITE-------MKNQYYV------------------- 209

Query: 293 RRQARLQLASLNQELS------KVREREQLEI-IRSPVDGTVQQLSVYTLGAVLQPAQNL 345
             +AR +LA  N E+       K RE     +   +PV G V+ + V T+G V+ P   L
Sbjct: 210 --RAREELAKANAEIEAQRSVMKGREDSLTRLTFNAPVRGIVKDIDVTTVGGVIPPNGKL 267

Query: 346 MIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDE 405
           M +VP +     E +I  +DV F++PGQ   VKV A+ Y+ YG ++ E+  IS D+  DE
Sbjct: 268 MSLVPLDDQMVIEAKISPRDVAFIHPGQKALVKVTAYDYSIYGGLEGEVTMISPDTLQDE 327

Query: 406 QLGLVFPAQIQLKT--NHIM-IDGQTVELTPGMSVVAEIKTDKRRVIDYLLSPIQEYQAE 462
               V+  ++ ++T  NH+    G+T  + PGM    +IKT  + ++DYLL P+ + + E
Sbjct: 328 VKRDVYYYRVYIRTDSNHLTNKQGKTFPVFPGMIATVDIKTGNKTILDYLLKPLNKAK-E 386

Query: 463 ALRER 467
           ALRER
Sbjct: 387 ALRER 391