Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., Colicin V secretion protein CvaA from Enterobacter sp. TBS_079

 Score = 71.2 bits (173), Expect = 6e-17
 Identities = 85/426 (19%), Positives = 174/426 (40%), Gaps = 50/426 (11%)

Query: 49  PPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSRLLSIH 108
           P  P   VT L++   V+A L +        + T  G +    RS  + +  Q  ++   
Sbjct: 22  PGIPVWLVTGLSVFF-VIAFLTFVLTFTYTRRITVVGEITTYPRSSNVYASVQGVVVKQF 80

Query: 109 VRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDPMFTAL 168
           V++GQ ++ G  +  +D                   ++  R   + ++Q +  D   T +
Sbjct: 81  VKEGQLLKVGDAIYMIDV------------------SKSTRSGVVSDNQRMDVDNQLTRI 122

Query: 169 PAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQLTENISQRLAA 228
            ++  +L+ EN  +            +A +K +       Q  +H +    EN  +   A
Sbjct: 123 -SQIMSLLQENKKNTLEMLKKQKEQYSAALKRSSDIITQAQEGLHVMKTNMENY-RHYQA 180

Query: 229 RKKLNQVKVIGHVE-YLEQEKELLEAQRQVAQQRAELEVLKSQYESLEERLTGFKAQKQR 287
           R  + Q ++I  +  Y E++  ++    Q  Q   ++  L+SQ ++           +  
Sbjct: 181 RGLITQDQLINQIALYYERQNNMINLSAQSDQNALQVTTLESQIQT-----------QAA 229

Query: 288 EWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMI 347
           E+  +  Q  LQ   L +E   +     + IIR+  +G V  LSV T+G +++P  +L+ 
Sbjct: 230 EFDNQIHQMELQRYELQKERLSIDAGGAI-IIRAMANGRVDSLSV-TVGQMIKPGDSLLQ 287

Query: 348 IVPENRVQ-QAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTIDAELLSISRDSTTDEQ 406
           I+P N       + + N  V ++  G  V ++ +AFP  ++G     +  ISR   + ++
Sbjct: 288 IIPYNIDHFSLVIWVPNDAVPYLNVGDRVNIRYEAFPAQKFGMFGGAISVISRSPASPQE 347

Query: 407 L--------------GLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTDKRRVIDYL 452
           +                 +   I+    +I   G+ + L  GM   + +  +KR++  ++
Sbjct: 348 MQTYQGALKVASSSAAPYYKVIIKPDRQNIAYAGKRLSLGNGMQAQSTLFLEKRKIYQWM 407

Query: 453 LSPIQE 458
           LSP  +
Sbjct: 408 LSPFYD 413