Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 436 a.a., type I secretion adaptor protein RsaE from Caulobacter crescentus NA1000

 Score =  100 bits (249), Expect = 1e-25
 Identities = 100/442 (22%), Positives = 186/442 (42%), Gaps = 35/442 (7%)

Query: 47  QRPPSPF---ARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQSR 103
           QRP   F   AR+    ++L  +  L WA +  LD    A G +   G  + +Q  E   
Sbjct: 7   QRPTDNFQAVARIGYGIIALTFVGLLGWAAFAPLDSAVIANGVVSAEGNRKTVQHLEGGM 66

Query: 104 LLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHDP 163
           L  I VR+G++V+ G  L  LD    N       + A    N+ +  + +    L   D 
Sbjct: 67  LAKILVREGEKVKAGQVLFELDPTQAN-------AAAGITRNQYVALKAMEARLLAERDQ 119

Query: 164 M----FTALPAEQQA--LIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIHALLQ 217
                F A    Q+A  ++      E+ +F     +I  ++ +    +   QS+I  + +
Sbjct: 120 RPSISFPADLTSQRADPMVARAIADEQAQFTERRQTIQGQVDLMNAQRLQYQSEIEGIDR 179

Query: 218 LTENISQRLAA-------RKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQ 270
            T+ +  +L          +KL    ++     L  E+E       + +  A+       
Sbjct: 180 QTQGLKDQLGFIEDELIDLRKLYDKGLVPRPRLLALEREQASLSGSIGRLTADRSKAVQG 239

Query: 271 YESLEERLTGFKAQKQREWLEKRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQL 330
               + ++   K +   +  +   + R++LA + ++     + ++   I SPV+GT Q L
Sbjct: 240 ASDTQLKVRQIKQEFFEQVSQSITETRVRLAEVTEKEVVASDAQKRIKIVSPVNGTAQNL 299

Query: 331 SVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTI 390
             +T GAV++ A+ L+ I PE+     +      DV  V+ G    V++ AF       +
Sbjct: 300 RFFTEGAVVRAAEPLVDIAPEDEAFVIQAHFQPTDVDNVHMGMVTEVRLPAFHSREIPIL 359

Query: 391 DAELLSISRDSTTDEQ------LGLVFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIKTD 444
           +  + S+S+D  +D Q      LG+V   ++ +K     + G+   +T GM     + T 
Sbjct: 360 NGTIQSLSQDRISDPQNKLDYFLGIV---RVDVKQLPPHLRGR---VTAGMPAQVIVPTG 413

Query: 445 KRRVIDYLLSPIQEYQAEALRE 466
           +R V+ YL SP+++     +RE
Sbjct: 414 ERTVLQYLFSPLRDTLRTTMRE 435