Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., type I secretion adaptor protein hlyD from Caulobacter crescentus NA1000

 Score = 81.3 bits (199), Expect = 6e-20
 Identities = 97/434 (22%), Positives = 182/434 (41%), Gaps = 49/434 (11%)

Query: 34  HHYEFLPAHLALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRS 93
           H    L   + LA   PS   RV A  + L VLA   +A       + T  G L      
Sbjct: 12  HATRRLAGEVVLATSVPS---RVLAGLVCLVVLAGATFAATASYARKETVVGWLTPQAGM 68

Query: 94  QVIQSYEQSRLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTL 153
             + + +   + ++HVR+G RV  G P+ TL           L S  E   +  +  R+L
Sbjct: 69  IRLAARQGGIVANVHVREGDRVVVGQPIATLT----------LSSALEGGDSFAVLSRSL 118

Query: 154 LNDQLLTHDPMFTALPAEQQALIHENYLSEKNEFDSTLASITAEMKVNRTSQAARQSDIH 213
                       ++    + A       +E  +     A++  E+   + S A +     
Sbjct: 119 GAQ---------SSAAGSRAAATQAALAAESRQLTQRRAALNRELAEAKRSLALQ----- 164

Query: 214 ALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAELEVLKSQYES 273
                TE ++    AR ++ + + I    +L   +       ++A Q+ E   L SQ  S
Sbjct: 165 -----TERLT---LARAEVARAETIAAQGFLSPRELQARRSAELAVQQ-EASTLSSQALS 215

Query: 274 LEERLTGFKAQKQREWLE---KRRQARLQLASLNQELSKVREREQLEIIRSPVDGTVQQL 330
            E ++    A+     ++    R +A   LA L Q+ ++V E +   ++ + V G V  L
Sbjct: 216 YERQIGEVDARLAAIPIDLQAARAEAASTLAGLEQQATQV-EAQGRYVVVATVAGRVAAL 274

Query: 331 SVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVTVKVDAFPYTRYGTI 390
            V   G  +     + ++ P +    AE+   ++  GFV  GQ V +   AFP+ ++G  
Sbjct: 275 PVEA-GQTVGVGAAVAVLTPGDSALVAELYAPSRAAGFVRQGQEVRLMYQAFPHQKFGVG 333

Query: 391 DAELLSISRDSTTDEQLGL--------VFPAQIQLKTNHIMIDGQTVELTPGMSVVAEIK 442
           +  + ++SR      ++ +        VF  +++L  +++   G+T+ L PGM + A++ 
Sbjct: 334 EGVVTAVSRTVLAPSEVAIPGLQVQEPVFRIRVKLARDNVAAYGETLPLQPGMLLSADVV 393

Query: 443 TDKRRVIDYLLSPI 456
            D+R ++++LL P+
Sbjct: 394 IDRRSLLEWLLDPL 407