Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., HlyD family secretion protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  105 bits (261), Expect = 4e-27
 Identities = 110/445 (24%), Positives = 193/445 (43%), Gaps = 41/445 (9%)

Query: 43  LALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQS 102
           +A+    P   AR     +   V+A LLW++ G+ DV  +A G L      + I +    
Sbjct: 22  IAILTAEPVRLARALIWAMVGLVVAGLLWSFVGRADVIVSAQGTLSPDSEVRRIYAPIDG 81

Query: 103 RLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHD 162
            L  +++ +GQ V KG  L  L+  G  +  +  + QA+ +  +  R       +    +
Sbjct: 82  ELADLYIAEGQPVSKGDVLARLNARGAIEAASNAL-QAQLKLEDAERDWKQFPQKKALLE 140

Query: 163 PMFTALPA--EQQALIHENYLSE---------KNEFDSTLASI--------TAEMKVNRT 203
               AL A  E +A +HEN +SE         K E D   + +         A  +++R 
Sbjct: 141 RRAAALKAQMEVEARLHENRISEGTSKLAEGQKAELDEARSVLDNARRVREAARQELDRY 200

Query: 204 SQAARQSDIHALLQLTENISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRAE 263
           SQ   Q     + +L   + Q+  A  + +    +   +  E +  L     + A+  AE
Sbjct: 201 SQLFAQPGGGGIAEL--QVEQKRTAAMEADNAYRVAQSKLAELDFRL---SHEYAKANAE 255

Query: 264 LEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLAS---LNQELSKVR----EREQL 316
           LE    Q   L+ +         R+  +   + RLQL S   +++  +++R    +++  
Sbjct: 256 LETSGQQTTDLQLQYDA----AVRDVTDVEDKLRLQLQSARLVSEAAARIRFENIDKDNF 311

Query: 317 EIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSVT 376
            +I +PV G +  ++    G  +Q    L  + P++     +++I   D  F++ G  V 
Sbjct: 312 LLILAPVSGVITDVTSTQRGDKIQANSPLGGVAPKDAKPVLKIEIAEHDRAFLHEGLPVK 371

Query: 377 VKVDAFPYTRYGTIDAELLSIS---RDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELTP 433
           +K +AFPY RYG I   L  IS   + S  D+Q   V+  ++ L  N+  I G    L  
Sbjct: 372 LKFNAFPYQRYGLISGTLAYISPATKPSLQDKQ--PVYEGRVTLDKNYYEIAGTRYPLRY 429

Query: 434 GMSVVAEIKTDKRRVIDYLLSPIQE 458
           GM+  AEI   +RR+ID  L P ++
Sbjct: 430 GMTASAEIVVRERRLIDLGLDPFRQ 454