Pairwise Alignments

Query, 467 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., hemolysin D from Burkholderia phytofirmans PsJN

 Score =  101 bits (252), Expect = 5e-26
 Identities = 110/446 (24%), Positives = 191/446 (42%), Gaps = 43/446 (9%)

Query: 43  LALAQRPPSPFARVTALTLSLGVLAALLWAYWGKLDVQATATGRLVVSGRSQVIQSYEQS 102
           +A+    P   AR     +   V+  LLW++ G+ DV  +A G L      + I +    
Sbjct: 22  IAILMAEPVRLARALIWAMVALVVVGLLWSFVGRADVIVSAQGTLSPESEVRRIYAPIDG 81

Query: 103 RLLSIHVRDGQRVEKGAPLLTLDTLGVNQDITRLVSQAEFQTNELIRYRTLLNDQLLTHD 162
            L  +++ +GQ V+KG  L  L+  G  +  +  + QA+ +  +  R      ++    +
Sbjct: 82  ELADLYIAEGQPVQKGDVLARLNARGAIEAASNAL-QAQLKLEDAERDWKQFPEKKALME 140

Query: 163 PMFTALPA--EQQALIHENYLSE---------KNEFDSTLASITAEMKVNRTSQAARQS- 210
               AL    E +A  HEN +SE         K E D   + +       RT +AARQ  
Sbjct: 141 RKAAALKTQMEVEARQHENRVSEGTTKLAEGQKAELDEARSILD---NARRTREAARQEL 197

Query: 211 DIHALLQLTEN--------ISQRLAARKKLNQVKVIGHVEYLEQEKELLEAQRQVAQQRA 262
           D ++ L             + Q+  A  + +    +   +  E +  L     +  Q  A
Sbjct: 198 DRYSRLFAQPGGGGIAELQVEQKRTAAMEADNAYRVAQSKLAELDFRL---SHEYTQANA 254

Query: 263 ELEVLKSQYESLEERLTGFKAQKQREWLEKRRQARLQLAS---LNQELSKVR----EREQ 315
           +LE    Q   L+ +         R+  +   + RLQL S   +++  +++R    +++ 
Sbjct: 255 QLETSGQQTTDLQLQYDS----AVRDITDAEDKLRLQLQSARLVSEAAARIRFENIDKDN 310

Query: 316 LEIIRSPVDGTVQQLSVYTLGAVLQPAQNLMIIVPENRVQQAEVQILNKDVGFVYPGQSV 375
             +I +PV G +  ++    G  +Q    L  I P++     +++I   D  F++ G  V
Sbjct: 311 FLLILAPVSGVITDVTSTQRGDKIQANAPLGGIAPKDARPVLKIEIAEHDRAFLHEGLPV 370

Query: 376 TVKVDAFPYTRYGTIDAELLSIS---RDSTTDEQLGLVFPAQIQLKTNHIMIDGQTVELT 432
            +K +AFPY RYG I   L  IS   + S TD+Q   V+  ++ L  N+  I      L 
Sbjct: 371 KLKFNAFPYQRYGLISGTLAYISPATKPSLTDKQ--PVYEGRVTLDKNYYQIADTRYPLR 428

Query: 433 PGMSVVAEIKTDKRRVIDYLLSPIQE 458
            GM+  AEI   +RR+ID  L P ++
Sbjct: 429 YGMTASAEIVVRERRLIDLGLDPFRQ 454