Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 591 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  282 bits (722), Expect = 3e-80
 Identities = 205/580 (35%), Positives = 305/580 (52%), Gaps = 36/580 (6%)

Query: 166 QLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLS------------SLHVLALAMLA 213
           Q+      +I  +IF L  P+L    +D V+V R  S             L +L L    
Sbjct: 18  QVLSAIACSILNKIFDLAPPVLIGMAVD-VVVQRQDSWLAKWGVVPVEQQLGLLVLFSFV 76

Query: 214 LAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVRE-MA 272
           +   E  + YL    +  LA  +  EL    Y HL  L L++F++R TGQ+++ + + + 
Sbjct: 77  IWSLESLFEYLYAWQWRTLAQTLQHELRLDAYGHLQELELSFFEERSTGQLLSVLNDDIN 136

Query: 273 QIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPL-IRKK 331
           Q+ +FL      +L     V      M + + T+  L I  L I  +LW   G L  +++
Sbjct: 137 QLERFLDHGANEILQVTTTVLAVGGAMAYLSPTVAGLAI--LPIPVILW---GSLRFQRR 191

Query: 332 VESEY----ESDANATTFLTEAVTGIETIKTTATEH----RFLEQWQRILSQQLNRSFDA 383
           +   Y    E     +  L   + GI TIK+   E     R  E       +Q NR   A
Sbjct: 192 LAPRYARVREQAGLISARLANNLGGIATIKSFTAEAFEKGRVAEDSDAY--RQANRRAIA 249

Query: 384 QKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQI 443
             S  +     A++    A  +L+ G    + G +  G       +   +  P+  L ++
Sbjct: 250 LSSAFVPLIRFAILFAFIA--ILYVGGMETINGRLDVGTYSFLVFITQRLLWPLTSLGRV 307

Query: 444 WQDFQHTLIALRRVGDILDEPRENSKQGLASVP--ELDGGIEFSNIRFRYHQDAPEVLAN 501
             D+Q  + + +RV D+L  P +    G  S+P  ++ G ++F  I F Y    P V+ +
Sbjct: 308 LDDYQRAMASTQRVMDLLAIPVQ-IPSGRQSLPIGQVQGAVQFEGITFAYRDREPSVI-D 365

Query: 502 LSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSV 561
           L+L I  GQ I + G +GSGKSTL +LL R Y PQ G++L+DG+DL       LR+ +  
Sbjct: 366 LNLNIPAGQTIAIVGATGSGKSTLVKLLLRFYEPQTGRILLDGIDLRDLKLKDLRQAIGF 425

Query: 562 VLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALS 621
           V Q+  LF GSVA+NI      A+  EI  AA+LA A  FI  LP G++  VGE+G  LS
Sbjct: 426 VSQDVFLFHGSVAENIAYGSFDATQTEIEQAAKLAEAHEFIMDLPQGYDTVVGERGQKLS 485

Query: 622 GGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTI 681
           GGQRQR+A+ARA+L +P IL+LDEATSA+D  +EA+I  ++++I R RT ++IAHRL+TI
Sbjct: 486 GGQRQRLAIARAILKDPPILILDEATSAVDNETEAAIQRSLEQITRDRTTLAIAHRLSTI 545

Query: 682 RHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQVGE 721
           RHAD I+V+D+G++ E+G H+ELLA  GLYA LW  Q GE
Sbjct: 546 RHADCIYVMDQGRLVEAGHHDELLALDGLYANLWKVQTGE 585