Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  291 bits (746), Expect = 5e-83
 Identities = 178/577 (30%), Positives = 302/577 (52%), Gaps = 11/577 (1%)

Query: 147 KEVKFGLSWFAPSILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHV 206
           K   + L W  P +  Q   +    L  +    F  +   L   +++ ++ G+      +
Sbjct: 9   KHASYNLLW--PYLRPQTKTIVQALLCTLVFTAFWPILAFLAGQMVNLLVQGKVWELARL 66

Query: 207 LALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIA 266
            A+ ++   I + A  Y ++++    A Q+   L    YRH+  L L+YF++ +TG +  
Sbjct: 67  AAITIVGFLIHKAA-QYGQDSLMAKAALQIAYNLRVNTYRHIQSLSLSYFEKAKTGDLTY 125

Query: 267 RVRE----MAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWL 322
           R+ E    + ++   +       +L LI V  ++ +  ++  TL  LVI  ++ + V W 
Sbjct: 126 RMTEDIDRVGEVVNKVFHDATPSILQLIVVLSYM-IYLNWTLTLAILVIAPIMGFLVGWF 184

Query: 323 IAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFD 382
               L+  +      SD ++   LTE  +GI  ++  A E   +E++ R   +     + 
Sbjct: 185 GQQMLVFSRRSQSRISDLSS--LLTEVFSGIRLVRAFAAEPYEIERFSREAERNREARYR 242

Query: 383 AQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQ 442
                 I    I  +Q  +   ++  G   +  G++    L ++      +  P++ L  
Sbjct: 243 TAWLRAIQYPVIGFLQAASILFIVVLGSWQISTGQLNGPNLGSYVAAIAMLIDPIVHLID 302

Query: 443 IWQDFQHTLIALRRVGDILD-EPRENSKQGLASVPELDGGIEFSNIRFRYHQDAPEVLAN 501
            + +F+    +L R+ ++L  EP          +P + G +EF  + F Y  D+  VL  
Sbjct: 303 NFNEFKQGQASLDRIDELLSIEPAVQEDPQSRMLPPITGKVEFRQVSFSYRSDSAPVLRQ 362

Query: 502 LSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSV 561
           L+L ++PG+ + + G SG+GKSTL  L+ R Y PQ G++LVDG+ +      SLRR + +
Sbjct: 363 LNLTVEPGEAVALVGASGAGKSTLVNLIPRFYDPQDGEILVDGIPIRSVTLGSLRRQIGI 422

Query: 562 VLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALS 621
           V QE+ILFSG++A NI   + Q     +  AA++A A  FI  +P G++  VGE+G  LS
Sbjct: 423 VPQETILFSGTIAQNIAFGQRQFDRAAVEEAARIANAHQFISQMPDGYDTWVGERGVNLS 482

Query: 622 GGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTI 681
           GGQRQR+A+ARA+L++PRIL+LDEATSALD  SE  +   ++ + +GRTV  IAHRL T+
Sbjct: 483 GGQRQRLAIARAVLLDPRILILDEATSALDSESETLVQEALERVMQGRTVFIIAHRLATV 542

Query: 682 RHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQ 718
           R+A  I V+++GQ+ E+G H+ LLA+ G YA+ + QQ
Sbjct: 543 RNASRILVMERGQIVEAGNHDALLAEAGRYARYYAQQ 579