Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 601 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  268 bits (685), Expect = 6e-76
 Identities = 178/565 (31%), Positives = 286/565 (50%), Gaps = 30/565 (5%)

Query: 173 YAIALQIFALVSPM------LFENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRN 226
           YA A+    +V+        + E V+++    R    + ++  A+ A  +     +Y + 
Sbjct: 35  YAFAIACLVVVAATTGFTAWIMEAVVNEAFANRRADIVLLICGAIFAAFVLRGLATYGQA 94

Query: 227 TVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIARVRE-MAQIRQFLTGSTLML 285
                + + + A    RLY HL+ L + YF + ++ Q+ A+V + ++ IR  L  +   +
Sbjct: 95  VALSKIGNNIVARYQRRLYAHLMALSVGYFHEHRSAQLAAKVSQNVSGIRDVLNMTVTSI 154

Query: 286 LLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGPLI----------RKKVESE 335
             DL+ +   + VMF    +  WL+  SL+++FV    A PL+          R      
Sbjct: 155 ARDLLTLIGLVVVMF----SKDWLL--SLIVFFV----APPLLLGLRYISRRLRLATREA 204

Query: 336 YESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIA 395
            E ++     + E + GI  +K    E+    + + I+ +  NR+    +          
Sbjct: 205 VEVNSRVLGAMQETIQGITIVKAFTMENELRRKVESIIDRAENRANRIARLSERTAPMTE 264

Query: 396 LVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALR 455
               L  + +L +     +   + PG   AF         P  RLA++    +   +  R
Sbjct: 265 TFAGLAISSVLAYAAFRTIYHNVPPGAFFAFVTALLMAYDPARRLARLQVSMERAAVNAR 324

Query: 456 RVGDILDE-PRENSKQGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGV 514
            + +ILD  P +  +     +   +  +E  ++RF Y     E+L  +S + + G+   +
Sbjct: 325 MIYEILDTVPHQRDRPDATELRLGEATVELRDVRFAYGT-GEEILKGVSFRAEGGKTTAL 383

Query: 515 TGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVA 574
            GPSG+GKST+  L+ R Y P  G++L+DG ++A     SLR  ++ V Q+  LF GS+ 
Sbjct: 384 VGPSGAGKSTIISLIPRFYDPLSGEILIDGQNIAGVTKQSLRAGLAYVSQQPYLFEGSIR 443

Query: 575 DNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARAL 634
           DNIR  +P A+D EI  AA+LA A  FI   P G++ PVGE G  LSGGQRQR+++ARAL
Sbjct: 444 DNIRYGRPDATDAEIEEAARLAYAHDFILAQPQGYDTPVGEHGVTLSGGQRQRLSIARAL 503

Query: 635 LVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQ 694
           + N  +LLLDEATSALD  SEA++   ++E   GRTVI IAHRL+T+ +AD I V+ +G 
Sbjct: 504 VRNAPVLLLDEATSALDTESEAAVQKALEEAMSGRTVIVIAHRLSTVVNADKIVVMKEGI 563

Query: 695 VAESGTHEELLAQ-QGLYAKLWTQQ 718
           V E G+HEEL  +  GLYA+L   Q
Sbjct: 564 VVEEGSHEELARRPDGLYARLHNLQ 588