Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., toxin secretion ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  288 bits (738), Expect = 5e-82
 Identities = 200/692 (28%), Positives = 338/692 (48%), Gaps = 12/692 (1%)

Query: 28  IEAVVYAGQQFHKKSTSSQLKHALGVSYANLTDMEMREAADYLGLKSQITKLSIQAFNTL 87
           ++++V   + F    +S  L   L +S A LT   + +AA   GL +++T+  +   + +
Sbjct: 26  LDSLVLLTEYFGSPCSSESLAAGLPLSGAILTPDLVPQAAARAGLNARLTRKGLDQISPI 85

Query: 88  PLPALIEYQGGWKVMIQTDDNGWTAYD-PATDSLHTLSFTSAESTAHYKVMLI-----AD 141
            +P ++  +     +++   +       P T    TL     E+     + L+      D
Sbjct: 86  MMPCILLLKDKKACLLRELTSEKAVIQLPETGGEETLPVEQLETLYVGYLFLVKQQYRGD 145

Query: 142 ESLSVKEVKFGLSWFAPSILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSL 201
               V        W   ++       RD  + ++ + +FALVSP+   NV DKV+   + 
Sbjct: 146 MRFDVHHHDNKSHWLLKTLKDAAPIYRDALIASVLVNLFALVSPLFIMNVYDKVVPNLAF 205

Query: 202 SSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQT 261
            SL VLA+      I +     LR+ +      +V+  +S +L+   VG+PL+  +    
Sbjct: 206 ESLWVLAIGAGIAYIFDLVMRQLRSYLIDVAGKKVDIIVSSQLFAKAVGIPLSK-RSPSV 264

Query: 262 GQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVI--GSLVIYFV 319
           G +  ++ E   IR  LT +T+  L+DL F   FL ++F  A  L  L +  G+++I + 
Sbjct: 265 GGMAKQLGEFDSIRDILTSATITTLVDLPFAVFFLIIIFIVAGDLAVLPLLGGAIIIGYT 324

Query: 320 LWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNR 379
           L++   P ++  ++   +  +     L E++  +E+IK    E    + WQ+++    N 
Sbjct: 325 LYI--QPKLKAAIDESNKFASLKHGHLIESLAALESIKAYGAEGLVQKSWQQMIGHTANW 382

Query: 380 SFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLR 439
              A+K         + + +LT   ++  GV  V    I+ G ++A  ML+     P+ +
Sbjct: 383 QLKAKKLSNSVSNVASFMVQLTVVGVVILGVYRVADNAISMGGIIAAVMLSSRAMSPMAQ 442

Query: 440 LAQIWQDFQHTLIALRRVGDILDEPRENSKQG-LASVPELDGGIEFSNIRFRYHQDAPEV 498
           LA +     HT  ALR++  I+ +  E   +G L S   L G IE  ++ F Y      V
Sbjct: 443 LASLLTRANHTASALRQLDQIMTQEDEFENKGHLVSKTRLMGKIEADHVSFCYPGSEKPV 502

Query: 499 LANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRN 558
           L   SL I+PG+ + + G +GSGKSTL +LL  LY P  G +  DG+D A   P  LRRN
Sbjct: 503 LHPTSLSIQPGEKVAIIGRNGSGKSTLAKLLCGLYKPTKGSLRYDGIDSAQIHPSDLRRN 562

Query: 559 MSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGA 618
              + Q+ +LF GS+ DNI     Q S+ ++  A Q++G   F      G +Q VGE G 
Sbjct: 563 FGYLPQDVVLFHGSIRDNILFGTRQVSEHQLIRAVQISGVSLFTNLESEGLDQQVGEGGQ 622

Query: 619 ALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRL 678
           ALS GQRQ +ALARA L +P ILL+DE T++LD  +E   +  M+ + + RT++ I H++
Sbjct: 623 ALSRGQRQTVALARATLNDPPILLMDEPTASLDARAEKQFIRAMEHVSKDRTLVIITHKM 682

Query: 679 NTIRHADNIFVLDKGQVAESGTHEELLAQQGL 710
           + ++  D + VLD+G V   G   ++L +  L
Sbjct: 683 HLLKLVDRVIVLDRGHVLADGPKNDVLEKLSL 714