Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., ATP-binding cassette domain-containing protein from Rhodopseudomonas palustris CGA009

 Score =  276 bits (706), Expect = 3e-78
 Identities = 187/573 (32%), Positives = 292/573 (50%), Gaps = 22/573 (3%)

Query: 158 PSILRQKSQLRDVFLYAIALQIFALVSPMLFENVIDKVLVGRSLSSLHVLALAMLALAIA 217
           P +   K  L  V    +   +F ++ P+  + +ID  L       L+ +   +    + 
Sbjct: 134 PVVANYKKMLAFVVFGVVVETLFNVIMPLSLKFLIDDALGEEDFHELYKILSILGVAGVI 193

Query: 218 EPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLPLTYFKQRQTGQIIAR----VREMAQ 273
               +         L++ V +++  RL+ H   LP  YF + + G+I++R    +   ++
Sbjct: 194 TSIIAVWYERWDARLSAAVISDVRTRLFEHTQRLPAGYFARTKRGEILSRFSIDMAAFSR 253

Query: 274 IRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWLIAGP--LIRKK 331
           + + L  + L+  L+LI   + +         L W +    ++ F + LI GP  L  K 
Sbjct: 254 VVEILANTALLPFLELIAGIILMLF-------LNWQLAVVALLIFPITLI-GPRILTPKA 305

Query: 332 VESEYES---DANATTFLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKSGL 388
           V++ YE    +A     L E V     +K  + + +    +   L  Q  R    Q + L
Sbjct: 306 VQANYEQKVQEAGLLGLLQENVGAQAVVKAFSLQRKMFGFFS--LRNQATRQKMGQATFL 363

Query: 389 --IAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQD 446
             +  +++ +   +   L+L  G      G+IT G  V F      V+  +  L Q    
Sbjct: 364 TSMVERSVTVSVLMLHLLVLALGAYLATTGQITVGTFVTFESAFWEVSYNIAHLMQFIPV 423

Query: 447 FQHTLIALRRVGDILDEPRENS-KQGLASVPELDGGIEFSNIRFRYHQDAPEVLANLSLK 505
                 A+R + ++LDE    S K G A +P +   I F  + F Y      V+ NLSLK
Sbjct: 424 SIQAAAAVRHMQELLDEKTPISDKPGAAEMPRIVDNIAFERVSFAYEGAEQPVIDNLSLK 483

Query: 506 IKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQE 565
           +K G+ I + GPSGSGKSTL  ++ RLY P  G++ +DG+D+      SLRR+M+VV QE
Sbjct: 484 LKAGKTIAIVGPSGSGKSTLLNMVLRLYDPTEGRISIDGVDIRNVTLDSLRRSMAVVFQE 543

Query: 566 SILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQR 625
           ++LF+ S+ DNIRL K  A+D E+  AA+ A    +I  LP  ++  VGE+G  LSGGQR
Sbjct: 544 NMLFNMSIRDNIRLGKEGATDAEVEQAAKKAEIHRYIMSLPQKYDTVVGERGDTLSGGQR 603

Query: 626 QRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHAD 685
           QRIA+ARA++ +P +LLLDEATSALD  +EA+I   + ++ RGRT+I   HRL ++   D
Sbjct: 604 QRIAIARAIVRDPSVLLLDEATSALDQTTEAAINKTLMKLARGRTMIFSTHRLTSVVDMD 663

Query: 686 NIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQ 718
            I V+  GQ  E G+H+ELLA+ G Y KLW  Q
Sbjct: 664 EIVVVSGGQAIERGSHKELLAKNGAYRKLWDDQ 696