Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., ABC transporter, ATP-binding protein from Phaeobacter inhibens DSM 17395

 Score =  272 bits (696), Expect = 3e-77
 Identities = 183/557 (32%), Positives = 300/557 (53%), Gaps = 21/557 (3%)

Query: 175 IALQIFALVSPMLFENVIDKVLVGRSLSSLHV----LALAMLALAIAEPAYSYLRNTVFG 230
           I  ++ A+ +PML++  +D  L G  +  L +    L +A     I    +  LR+ VF 
Sbjct: 47  ILAKLVAVYTPMLYKGAVDS-LAGEGVPPLALGAVGLTVAYGMARILTNGFQQLRDAVFA 105

Query: 231 HLASQVNAELSGRLYRHLVGLPLTYFKQRQTG---QIIAR-VREMAQIRQFLTGSTLMLL 286
            +  +    L+   +RH+  L + Y   R+TG   +II R V+ +  + +FL  S   L+
Sbjct: 106 PVGQRALRRLALETFRHIHRLSMRYHITRKTGGLSRIIERGVKGVEFLLRFLLFSIGPLV 165

Query: 287 LDLIFVTVFLAVMFHYASTLTWLVIGSLVIYFVLWL-IAGPLIRKKVESEY-ESDANATT 344
           L+L  V + LAV+F     + +LV+ ++ I F +W   A    R K+  E  + D +A  
Sbjct: 166 LELALVAIILAVLFD----IWYLVVVAVTIGFYVWFTFAITEWRVKLRREMNKQDTDANQ 221

Query: 345 FLTEAVTGIETIKTTATEHRFLEQWQRILSQQLNRSFDAQKS--GLIAGQAIALVQKLTA 402
              +++   ET+K    E R  E++   +      +     S   L  GQ++ +   L A
Sbjct: 222 KAIDSLLNYETVKYFGAEDRETERYDVAMRAYAKAALKTAYSLAFLNFGQSLVITGGLVA 281

Query: 403 ALLLWWGVSAVLKGEITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILD 462
            +++      V +G +T G  V  N     +T P+  L  ++++ + +L+ +  + D+++
Sbjct: 282 VMVM--AAIGVQQGNLTVGDFVMVNAYMIQITVPLNFLGTVYREIRQSLVDMGEMFDLIE 339

Query: 463 EPRENSKQGLASVPELDGG-IEFSNIRFRYHQDAPEVLANLSLKIKPGQFIGVTGPSGSG 521
           +  +   +  A V +++GG I   N+ F Y  D  ++L  +S ++  G  + + G +GSG
Sbjct: 340 QDPDVKDRDNAKVLQVNGGAITLENVEFGYDSDR-QILKGVSFEVAAGHTVAIVGSTGSG 398

Query: 522 KSTLTRLLQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCK 581
           KST+ RLL R Y    G + +DG D+      SL   + VV Q+++LF+ ++  NI   +
Sbjct: 399 KSTIGRLLFRFYDVTRGALRIDGQDVRDVTQKSLHAAIGVVPQDTVLFNDTIRYNIAYGR 458

Query: 582 PQASDEEIRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRIL 641
             A+ EE+  AA+ A    FI  LP G+   VGE+G  LSGG++QR+ +AR LL NP IL
Sbjct: 459 AGATQEEVEQAARDAQIHDFIMRLPEGYETQVGERGLKLSGGEKQRVGIARTLLKNPPIL 518

Query: 642 LLDEATSALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTH 701
           LLDEATSALD ++E  I   +    +GRTVI+IAHRL+T+  AD I VL++G++AE GTH
Sbjct: 519 LLDEATSALDSDTEQEIKEALSRAGQGRTVITIAHRLSTVAEADQIIVLEQGEIAERGTH 578

Query: 702 EELLAQQGLYAKLWTQQ 718
           +ELLA+ G YA LW +Q
Sbjct: 579 DELLAKDGRYAHLWQRQ 595