Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., multidrug/protein/lipid ABC transporter family, ATP-binding and permease protein from Caulobacter crescentus NA1000

 Score =  299 bits (765), Expect = 3e-85
 Identities = 194/552 (35%), Positives = 295/552 (53%), Gaps = 34/552 (6%)

Query: 188 FENVIDKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRH 247
           F+NVID        ++++   + + A+A+     + LR      L  +V A+L  +LY H
Sbjct: 77  FKNVIDHGFSKGQDAAINSAFVGLGAVALVLALATALRFFFITRLGERVVADLRRKLYGH 136

Query: 248 LVGLPLTYFKQRQTGQIIARVR-EMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTL 306
            + L   YF + +TG++++R+  ++A + Q +  S  + L +++ +   L  M   +  L
Sbjct: 137 TLSLDQPYFLKTRTGEVLSRLTTDVALVEQLVGASISIALRNILNLIGGLTAMAVVSPKL 196

Query: 307 TWLVIGSLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKT----TATE 362
              ++  + +      + G  +RK   +  +  A+A  +  E++  +ET++     +A+ 
Sbjct: 197 AGFIVLMVPVILAPMFLVGRRVRKLTVTAQDRFADAVGYAGESLDALETVQAFGRESASS 256

Query: 363 HRFLEQWQRILSQQLNRSFDAQKSGLIAGQAIALVQKLTAA-----LLLWWGVSAVLKGE 417
            RF    +      + R         I  +A      +T A     LLLW G   VL GE
Sbjct: 257 GRFGAAVEAAYKASVRR---------ITTRATMTAMVITLAFGGITLLLWTGARLVLAGE 307

Query: 418 ITPGQLVAFNMLAGHVTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLASVPE 477
           +T G L  F MLA      +  L ++W D Q    A+ R+ ++L     N+K  +A+ P+
Sbjct: 308 MTGGTLAQFAMLAVMAAGSIGALGEVWGDVQKASGAMDRISELL-----NAKPDIAAPPQ 362

Query: 478 L-------DGGIEFSNIRFRY--HQDAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRL 528
                    G I F N+ F Y    D P  L    L++KPG+ + + GPSG+GKST+ RL
Sbjct: 363 PKTLPVPGQGEIAFENVVFAYPGRPDLP-ALNGFDLRVKPGETVALVGPSGAGKSTVLRL 421

Query: 529 LQRLYVPQHGQVLVDGMDLAIADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEE 588
           L R Y PQ G +L+DG++L  A+P  +R  M++V Q+S LFSGS  DNIR  +P A+DE+
Sbjct: 422 LLRFYDPQSGCILLDGVNLRDAEPAEVRARMALVAQDSPLFSGSAMDNIRFGRPDATDEQ 481

Query: 589 IRHAAQLAGALAFIEGLPHGFNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATS 648
           +R AA  A A  F+  LP GF+ PVGE+   LSGGQRQR+A+ARAL+    ILLLDEATS
Sbjct: 482 VRAAADAAQATGFLSALPEGFDTPVGERAKTLSGGQRQRLAIARALVREAPILLLDEATS 541

Query: 649 ALDYNSEASIMSNMDEICRGRTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQ 708
           ALD  SE  +   +     GRT + IAHRL T+  AD I V+++G+V E G H EL A+ 
Sbjct: 542 ALDAESEQLVQQALATAMEGRTTLVIAHRLATVLKADRIVVMEEGRVVEQGAHAELFAKG 601

Query: 709 GLYAKLWTQQVG 720
           GLYA+L   Q G
Sbjct: 602 GLYARLARLQFG 613