Pairwise Alignments

Query, 721 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 1018 a.a., peptidase C39 from Burkholderia phytofirmans PsJN

 Score =  384 bits (985), Expect = e-110
 Identities = 224/711 (31%), Positives = 374/711 (52%), Gaps = 10/711 (1%)

Query: 17   LPQESPRTNWGIEAVVYAGQQFHKKSTSSQLKHALGVSYANLTDMEMREAADYLGLKSQI 76
            L +++   + G   +    + +    T  +L+    V+    T   +  A + LG  ++ 
Sbjct: 308  LVEQAEEMDCGAACLAMVCRHYSIPMTLGKLRELANVTTQGATLDSLARAGESLGFTARG 367

Query: 77   TKLSIQAFNTLPLPALIEYQGGWKVMIQ--TDDNGWTAYDPATDSLHTLSFTSAESTAHY 134
             + +  +     LP ++ ++G   V++   + +  W A DPA      ++    E     
Sbjct: 368  VQCTFDSLRGFDLPFIVHWEGYHYVVVYGLSKEYVWVA-DPAV-GFKKMTVEDFERGWSG 425

Query: 135  KVMLIADESLSVKEVKFGLSW--FAPSILRQKSQLRDVFLYAIALQIFALVSPMLFENVI 192
              +L       ++       W  F   +   K  L  +FL    +Q+  ++ P++ +N++
Sbjct: 426  TCLLFTGGPHLLQMSAARSPWIRFVGYLKPYKKILGHLFLATFVIQVLGVIPPLIIQNIL 485

Query: 193  DKVLVGRSLSSLHVLALAMLALAIAEPAYSYLRNTVFGHLASQVNAELSGRLYRHLVGLP 252
            D V+V +++S LH+L   ++   +     S +R  +   +   ++  +  + ++H + LP
Sbjct: 486  DGVIVHQNVSLLHLLIGGLIISNVFSQLMSSIRAYLANFMVRNMDFAMMSQFFKHTMSLP 545

Query: 253  LTYFKQRQTGQIIARVREMAQIRQFLTGSTLMLLLDLIFVTVFLAVMFHYASTLTWLVIG 312
             ++F +R+TG I AR +E   IR FLT ST+   L+L+ V ++  +MF Y   +T ++I 
Sbjct: 546  FSFFAKRKTGDIFARFQENQTIRAFLTESTVTTALNLLMVFIYFTIMFVYNVKMTLVLIA 605

Query: 313  SLVIYFVLWLIAGPLIRKKVESEYESDANATTFLTEAVTGIETIKTTATEHRFLEQWQRI 372
             ++    L  IA P I+      + +   + +FL EA+ G+ETIK    E     +W++ 
Sbjct: 606  FVIPIMALTAIATPKIKGYAREVFTASTESKSFLMEALAGVETIKGMGIERPVRLRWEKK 665

Query: 373  LSQQLNRSFDAQKSGLIAGQAIALVQKLTAALLLWWGVSAVLKGEITPGQLVAFNMLAGH 432
             ++ L   + A    ++ G    L+   T   +LW G + VL  E+T GQL+AFN   G 
Sbjct: 666  YAKALEVQYRAHAFNILVGLGSQLLNSATTIAILWVGANLVLAREMTIGQLIAFNAFMGS 725

Query: 433  VTQPVLRLAQIWQDFQHTLIALRRVGDILDEPRENSKQGLAS---VPELDGGIEFSNIRF 489
            V  P++ L  +W       +A+ R+GD+LD   E   Q L S   +PEL G I  S + F
Sbjct: 726  VLGPLMGLVGLWSMLNDAGVAMERLGDVLDIEPEQKPQDLPSRVMLPELQGEISLSGVYF 785

Query: 490  RYHQ-DAPEVLANLSLKIKPGQFIGVTGPSGSGKSTLTRLLQRLYVPQHGQVLVDGMDLA 548
            RY + D+  VL N+S  IKPG+ + + G SGSGK+TL +LL   Y P  G++ +DG DL 
Sbjct: 786  RYGENDSAYVLENISFDIKPGELVAIVGRSGSGKTTLAKLLVGFYTPTEGKMTIDGYDLG 845

Query: 549  IADPVSLRRNMSVVLQESILFSGSVADNIRLCKPQASDEEIRHAAQLAGALAFIEGLPHG 608
            + D    R  +  V+Q ++LFSG++++NI           I   A++A A  FI  +P G
Sbjct: 846  VVDKAYYRAQIGYVMQSNLLFSGTISENIASGDDAPDRRRIEEVAKMADAHGFISKMPLG 905

Query: 609  FNQPVGEKGAALSGGQRQRIALARALLVNPRILLLDEATSALDYNSEASIMSNMDEICRG 668
            + Q VGE+G  LSGGQ QR+ +ARAL  +PR+L+ DEATSALD  SE++I+ NM +I +G
Sbjct: 906  YEQIVGERGIGLSGGQIQRLCIARALYHDPRLLVFDEATSALDSQSESNILGNMHDILKG 965

Query: 669  RTVISIAHRLNTIRHADNIFVLDKGQVAESGTHEELLAQQGLYAKLWTQQV 719
            RT + IAHRL+TI  AD I VL +G + E G H+EL+ + G+Y +L  +Q+
Sbjct: 966  RTAVIIAHRLSTIMRADKILVLYEGAIVEQGRHDELIQRGGMYYQLVQKQL 1016