Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., histidine kinase from Pseudomonas fluorescens FW300-N2C3

 Score =  258 bits (658), Expect = 7e-73
 Identities = 165/402 (41%), Positives = 239/402 (59%), Gaps = 24/402 (5%)

Query: 184 KEELQKLVE-IRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILRG-EL 241
           +E+ Q + + I+TRE       AE+AN +KS FLAMMSHELRTP+N VLG++ +L    +
Sbjct: 242 REQHQAMAQLIKTREE------AEKANSAKSEFLAMMSHELRTPMNGVLGMLQLLETTRM 295

Query: 242 TSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQ-SLVYHRQI 300
           T  Q E       S E LL +INDILD SRIE     L     +L + +   +  +    
Sbjct: 296 TDEQHEYTALASESTEHLLKVINDILDFSRIERSALELEHIPFNLAELVGSCAQSFQHSA 355

Query: 301 AQDK-GVHFYVQSNKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDV-----VLDYT 354
           AQ K G+   V  +    L+   D  R+ QIL N++GNA+KFT+QG+V V      LD+ 
Sbjct: 356 AQRKLGLDLLVPDDMR-ALQVQGDPTRIRQILVNLIGNALKFTEQGRVTVQCQWQALDHE 414

Query: 355 KDGVVFRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQ 414
                  V+D+GIGI    +E++F  F QADNSI+R YGGTGLGL I + L E MGGT++
Sbjct: 415 LLWFTCTVRDSGIGIPAESLERMFDAFQQADNSISRRYGGTGLGLPIARTLAERMGGTLR 474

Query: 415 VESEFGIGTTFTLYIPLQSRLKNIKPSTSSSQQIV---NVKNHHILVVEDTKTNQMVIQL 471
            +SE G G+ FTL IPL   L    P T + +      + +  ++L+VED   NQ VI+ 
Sbjct: 475 AQSEEGQGSVFTLEIPL--ALSRQTPPTLAPRLPTGSGDGEGRNVLLVEDNPVNQTVIEA 532

Query: 472 LLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKH--IEIPI 529
           +L  LG+ V++A +G QAV   E + +F+ +LMD  +PI+DG  AT+ +R      E+PI
Sbjct: 533 MLRSLGFTVSVATDGAQAVRSAE-SLIFEAILMDCRLPIIDGYEATRQIRQLPGCDEVPI 591

Query: 530 IALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRFLN 571
           IALTA+    D++ C+ AGMND + KP +  D+ ++++R++N
Sbjct: 592 IALTANALQGDREACLAAGMNDYLAKPFKRNDLQQILQRWVN 633