Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1261 a.a., response regulator from Synechocystis sp000284455 PCC 6803

 Score =  230 bits (587), Expect = 2e-64
 Identities = 144/386 (37%), Positives = 224/386 (58%), Gaps = 16/386 (4%)

Query: 197 ELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDI-LRGELTSYQVELLEQMENS 255
           E++ A++LAE+A++ K++FLA MSHE+RTP+NAV+G+  + L+ +LT  Q E L ++  S
Sbjct: 512 EMKRAKELAEEASRIKADFLANMSHEIRTPMNAVIGMTHLALKTDLTPRQREYLHKIRFS 571

Query: 256 AELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKN 315
            + LL +INDILD S+IE+G   +     DL+K LD       + A +KG+      ++N
Sbjct: 572 GQHLLGVINDILDFSKIEAGKLPMESIDFDLDKVLDNVATLISEKATNKGLELLFDIDRN 631

Query: 316 PTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVL---DYTKDGVVF--RVKDTGIGIE 370
               +  D  RL QIL N   NA+KFT+QG + +V+   +Y    VV    VKDTGIGI+
Sbjct: 632 LPRHFIGDPLRLGQILINYANNAVKFTEQGDITIVVRLQEYRDQDVVLYLAVKDTGIGIK 691

Query: 371 KNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIP 430
              +  LF  F QAD+S TRN+GGTGLGLAI K + ELMGG + VESE+G G+TF   + 
Sbjct: 692 PEHIANLFNSFQQADSSTTRNFGGTGLGLAICKRIAELMGGEVGVESEYGQGSTFWAKVC 751

Query: 431 LQSRLKNIKPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAV 490
           LQ    N+ P      +  +++   +LVV+D    ++V++ LL ++ + V   E+G +A+
Sbjct: 752 LQK--SNVIPHRLVLSK--DLEGKRVLVVDDNDHARLVMKDLLEQMKFVVETVESGPEAL 807

Query: 491 ELL----EKNHVFDLVLMDISMPIMDGIAATKILRDKHI--EIPIIALTAHTAGSDKQNC 544
             L     +NH   +V +D  MP MDG+   + L+   +  +  I  +TA+         
Sbjct: 808 NFLAEADRENHPHSIVFIDWQMPNMDGLEVARRLKAMGLNHQPSIFIVTAYGREELFVKA 867

Query: 545 IDAGMNDIVLKPIRSKDIMEVVKRFL 570
              G++D+++KPI    + + + R L
Sbjct: 868 KSLGIDDVLVKPISPSVLFDSLARVL 893



 Score = 94.4 bits (233), Expect = 3e-23
 Identities = 49/119 (41%), Positives = 79/119 (66%), Gaps = 3/119 (2%)

Query: 446  QQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMD 505
            +++  ++   IL+VED + NQ V   LL  +G++V +A NGL A+E L  N+ + LVLMD
Sbjct: 917  EKLRRIRGARILLVEDNEINQEVAAELLRDVGFNVDVAANGLIALERLN-NNAYALVLMD 975

Query: 506  ISMPIMDGIAATKILRD--KHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDI 562
            + MP MDGI AT  +R   ++ ++PI+A+TA+    D++ C+ AGMND + KPI  +++
Sbjct: 976  MQMPEMDGIEATIAIRQNPRYAQLPIVAMTANVMQGDRERCLQAGMNDHLGKPIEPEEL 1034