Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1041 a.a., Periplasmic Sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  219 bits (559), Expect = 3e-61
 Identities = 144/397 (36%), Positives = 208/397 (52%), Gaps = 33/397 (8%)

Query: 197 ELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILR-GELTSYQVELLEQMENS 255
           EL  A+  A+ A ++K+ FLA MSHE+RTP+NAV+G+  +L  G L   Q++    ++ S
Sbjct: 490 ELVRARDAAQAAARAKAEFLATMSHEIRTPMNAVIGMTGLLLDGPLEPRQIDYARTIQRS 549

Query: 256 AELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKN 315
            E LL +INDILD SRI++G   L      L  ++   +      A  K +   +  ++ 
Sbjct: 550 GEHLLGLINDILDFSRIDTGRLVLVDRDFSLSHEVQAVVSLCGVAASAKRLSVRIDLDRA 609

Query: 316 PTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVLDYTK-----DGVVFRVKDTGIGIE 370
               Y  DS RL QIL N+VGNA+KFT +G V V  D  K       +  RV DTG GI 
Sbjct: 610 LAPGYRGDSQRLRQILVNLVGNAVKFTDKGMVTVQGDVLKIENDIHWLRLRVVDTGCGIP 669

Query: 371 KNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIP 430
           + R   LF  F Q D S TR +GGTGLGLAI++ L  LMGG I V S  G G+ F++ +P
Sbjct: 670 RERFNDLFAAFQQLDGSATRTHGGTGLGLAISRKLARLMGGDITVSSTPGEGSVFSVVVP 729

Query: 431 L----------------QSRLKNIKPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLN 474
           +                 +      P+     +    +   +LV ED   NQ+++Q +L 
Sbjct: 730 MVPLSRTPAPDGTLGDGDAERGEEPPAADVPTEAAASRALVVLVAEDILENQILVQAVLE 789

Query: 475 KLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKHIE-------- 526
           K G+ V +A NG +A+  L      D+VLMDI MP+MDG+ A + +R    E        
Sbjct: 790 KQGHRVILAANGREALAKLRGADPVDVVLMDIQMPVMDGLDACRAIRGLPPEVHFSDGRP 849

Query: 527 ---IPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSK 560
              +PIIA TA     D++  + AGMN+ + KP+ ++
Sbjct: 850 IAGVPIIAFTADALPGDRERFLSAGMNEHLAKPLNAR 886