Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1560 a.a., Multi-sensor Hybrid Histidine Kinase (NCBI) from Rhodospirillum rubrum S1H

 Score =  201 bits (511), Expect = 2e-55
 Identities = 143/404 (35%), Positives = 213/404 (52%), Gaps = 29/404 (7%)

Query: 180  DIEHKEELQKLVEIRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDIL-R 238
            D+  ++E +       R L LA++ AE+A+  K  FLA MSHE+RTP+NA+LG++ ++ R
Sbjct: 871  DVSRRKEFE-------RALVLAKQAAEEASVVKGQFLANMSHEIRTPMNAILGMLTLVQR 923

Query: 239  GELTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHR 298
              LT +Q + + +  ++A  LL ++NDILD S+IE+G   L  H   LE  L    V   
Sbjct: 924  TALTPHQADYVCKAHSAAGSLLGLLNDILDFSKIEAGKLHLEPHPFRLETVLRDLAVVLS 983

Query: 299  QIAQDKGVHFYVQSNKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDV---VLDYTK 355
                DKGV        +    +  D  RL Q+L N+ GNA+KFT QGQV V   VL    
Sbjct: 984  GSYGDKGVEVLFDIAPHLPDSFIGDDLRLRQVLLNLAGNALKFTDQGQVIVSVGVLARED 1043

Query: 356  DGVVFR--VKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTI 413
            D +  R  V DTGIGI  +++  +F  F QA+ S TR +GG+GLGL IT+HLVE MGG +
Sbjct: 1044 DRLTMRMAVSDTGIGIAADQLASIFGAFEQAETSTTRRFGGSGLGLTITRHLVERMGGVL 1103

Query: 414  QVESEFGIGTTFTLYIPLQSRLKNIKPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLL 473
            +VES+ G G+ F   I L         S   S+   + +   +LVVED      ++   +
Sbjct: 1104 RVESQPGRGSRFWFDITL-------PVSGEGSESAESGRPLRVLVVEDNPVAGGILAQTV 1156

Query: 474  NKLGYDVTI----AENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKHIEI-- 527
              LGYD  +    AE   + V        +D VL+D  MP +DG+   +ILR+  + +  
Sbjct: 1157 QGLGYDCDLVQESAETKARIVAADAAGRPYDAVLLDWRMPEVDGLTTARILREMGVTLCP 1216

Query: 528  -PIIALTAHTAG--SDKQNCIDAGMNDIVLKPIRSKDIMEVVKR 568
              II +TA+     S  +   DA  + ++ KP+    + + + R
Sbjct: 1217 QSIIMVTAYGRDVLSLAEQTGDAPFDAVLTKPVTPGQLRDALLR 1260



 Score = 73.2 bits (178), Expect = 8e-17
 Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 3/105 (2%)

Query: 456  ILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV-FDLVLMDISMPIMDGI 514
            +LVVED   N+ V   LL   G ++ +AE G + V ++ +  + +D VLMDI MP +DG 
Sbjct: 1287 LLVVEDNAINRQVAAELLAGAGAEIDLAEGGERGVMMVLRGEIAYDAVLMDIQMPDIDGF 1346

Query: 515  AATKILRD--KHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPI 557
             AT+ +R   +   +PI+A+TA+ + +D++ C+ AGM + V KPI
Sbjct: 1347 EATRRIRADARFKALPIVAMTANASRADREACLAAGMTEHVGKPI 1391