Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1047 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  261 bits (668), Expect = 8e-74
 Identities = 157/385 (40%), Positives = 233/385 (60%), Gaps = 11/385 (2%)

Query: 197 ELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDI-LRGELTSYQVELLEQMENS 255
           EL+ A++ AE AN++K  FLA MSHE+RTP+N +LG+ D+ L   LT  Q + LE +++S
Sbjct: 521 ELQQAKEAAESANRAKGEFLANMSHEIRTPMNGILGMTDLALDSALTPEQRDYLEMVKSS 580

Query: 256 AELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNKN 315
           A+ LL+IINDILD S+IE+G   L      L + L ++L      A+ + +    +  + 
Sbjct: 581 ADALLVIINDILDFSKIEAGKLELEHIHFHLRQLLRETLKPLELRARQRSLTLRCEVPEE 640

Query: 316 PTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVLDYTKDGVV-FRVKDTGIGIEKNRV 374
               Y  D  RL Q+L N+VGNAIKFT++GQV V ++  +DG++ F V DTGIGI  ++ 
Sbjct: 641 VADGYLGDPGRLRQVLINLVGNAIKFTEEGQVAVRVE-ARDGLLHFAVSDTGIGIPADKQ 699

Query: 375 EQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIPLQSR 434
           + +F  F QAD+S+TR +GGTGLGL I   LV LMGG + VES+ G G+TF     L++ 
Sbjct: 700 QLIFEAFSQADSSVTRRFGGTGLGLTICTRLVRLMGGHMWVESDPGQGSTFHFTARLEAV 759

Query: 435 LKNIKP-STSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELL 493
               +     + +  V +    +LV ED   NQ ++  LL K G+ VT+A+NG QA+  L
Sbjct: 760 AGPAESGEADAGRGEVVLPPLRLLVAEDNPVNQKLVLTLLQKRGHRVTLADNGQQALAAL 819

Query: 494 EKNHVFDLVLMDISMPIMDGIAATKILRDKHI------EIPIIALTAHTAGSDKQNCIDA 547
             +H FDLVLMD+ MP+M G+ AT+ +R           +PI+A+TA+    D++ C++A
Sbjct: 820 ATDH-FDLVLMDMQMPVMGGLEATRRIRAAEAARGDGQHLPIVAMTANAMAGDRELCLEA 878

Query: 548 GMNDIVLKPIRSKDIMEVVKRFLNP 572
           GM+  V KP+R  +    +   L P
Sbjct: 879 GMDGYVSKPLRRDEFFSAMADVLPP 903