Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 940 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  253 bits (646), Expect = 2e-71
 Identities = 157/389 (40%), Positives = 231/389 (59%), Gaps = 16/389 (4%)

Query: 183 HKEELQKLVEIRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILR-GEL 241
           H++ L++LV+ RTR+L   +  AE AN +KS FLA MSHE+RTPLNA+ GL  ++R   L
Sbjct: 537 HRQRLEELVQERTRQLEELKDAAESANVAKSAFLANMSHEIRTPLNAMTGLTHLIRRAGL 596

Query: 242 TSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIA 301
              Q E ++++E +A+ LL +IN ILDLS+IE+G F+L    + +E  L     + ++  
Sbjct: 597 KPQQAEHMDKLEAAAQHLLGVINAILDLSKIEAGKFALEEAPVRVESLLGNVASFLQERV 656

Query: 302 QDKGVHFYVQSNKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVLDYTKDGVV-- 359
           Q KG+    ++   P      D  RL Q L N  GNA+KFT+QG + + +   ++G    
Sbjct: 657 QAKGLVLRTEAQPLPP-HLLGDPTRLQQALLNYAGNALKFTEQGSITLRVHTLEEGEADA 715

Query: 360 ---FRVKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVE 416
              F V+DTGIGI    + +LF+ F QADNS TR YGGTGLGLAIT+ L +LMGG     
Sbjct: 716 LLRFEVQDTGIGIPPEAMHKLFSAFEQADNSTTRRYGGTGLGLAITRKLAQLMGGEAGAS 775

Query: 417 SEFGIGTTFTLYIPL---QSRLKNIKP-STSSSQQIVNVK--NHHILVVEDTKTNQMVIQ 470
           SE G G+TF     L   + R  N  P +  +++Q +  +     +L+ ED   NQ + +
Sbjct: 776 SEPGRGSTFWFTARLKKGKERYGNGAPLAGGNAEQRLRQEFAGRTVLLAEDEPINQEITK 835

Query: 471 LLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILR--DKHIEIP 528
            +L  +G  V +A +G  AVE    N  + L+LMD+ MP+MDG+ AT+ +R   +H + P
Sbjct: 836 FMLEDVGLRVELAPDGKVAVERARGND-YALILMDMQMPLMDGLDATREIRQLQRHRQTP 894

Query: 529 IIALTAHTAGSDKQNCIDAGMNDIVLKPI 557
           I+A+TA+    DK  C+ AGMND + KP+
Sbjct: 895 ILAMTANAFAEDKARCLGAGMNDFIAKPV 923