Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1281 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  247 bits (630), Expect = 2e-69
 Identities = 164/417 (39%), Positives = 244/417 (58%), Gaps = 21/417 (5%)

Query: 170  FRPLLERAISDIEHKEELQKLVEIRTRELRLAQKLAEQANQSKSNFLAMMSHELRTPLNA 229
            FR  LE+ +   +H+  L++LV  RT EL  A+  AE A+++KS FLA MSHE+RTP+NA
Sbjct: 781  FRLRLEQELE--QHRHHLEELVHARTMELAEARDEAESASRAKSAFLANMSHEIRTPMNA 838

Query: 230  VLGLIDILRGELTSYQV-ELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEK 288
            +LGL  +L  E+   +  E ++++  +A  LL IINDILDLS+IE+    L      L +
Sbjct: 839  ILGLSHLLGREVGDARARERVDKIHGAATHLLNIINDILDLSKIEAEKLHLDMQDFLLAR 898

Query: 289  KLDQSLVYHRQIAQDKGVHFYVQSNKNPTLEYYT--DSARLTQILFNIVGNAIKFTKQGQ 346
              D +    R   + KG+   ++ + +P L      D+  L QIL N + NA+KF+ QG 
Sbjct: 899  LFDNAENLLRPQLEAKGLR--LERHLDPALPPVLRGDAMHLQQILVNFLSNAVKFSDQGH 956

Query: 347  VDV---VLDYTKDGVVFR--VKDTGIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAI 401
            + +   +L  ++  V  R  V D GIGI   +   LF  F QADNS TR YGGTGLGLAI
Sbjct: 957  ITLGARLLSRSQSQVELRLEVADQGIGIAPEQQAALFQAFEQADNSTTRKYGGTGLGLAI 1016

Query: 402  TKHLVELMGGTIQVESEFGIGTTF--TLYIPLQSRLKNIKPSTSSSQQIVNVKNHH---- 455
            +K L+ LMGG I V+S+ G G+ F  +L + +         +T+  +    ++  H    
Sbjct: 1017 SKRLIRLMGGDIGVDSKPGQGSVFWISLRLEVADTAAGTTAATAEQELPARLRARHGGCR 1076

Query: 456  ILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIA 515
            IL+ ED   NQ V Q LL+  G  V++AE+G QAV L +    FDLVLMD++MP +DG+ 
Sbjct: 1077 ILLAEDNALNQEVAQDLLHDAGLAVSVAEDGHQAVSLAQSGG-FDLVLMDVNMPHLDGLQ 1135

Query: 516  ATKILRDKH--IEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRFL 570
            AT+ +R+     ++PI+A+TA     D+  C++AGMND V KP+  + + + + R+L
Sbjct: 1136 ATRAIRELPGCADLPILAMTAGAFAEDRARCLEAGMNDFVAKPVVPEVLYQALLRWL 1192