Pairwise Alignments

Query, 572 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1223 a.a., sensory box histidine kinase/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  224 bits (570), Expect = 2e-62
 Identities = 146/392 (37%), Positives = 219/392 (55%), Gaps = 28/392 (7%)

Query: 197  ELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDILRGELTSYQVELLEQ----M 252
            ++R ++  A   ++ KS F+A +SHE+RTPL+ +LG+ D+     T     LL      +
Sbjct: 832  QMRASRDEAAAMSELKSQFVANISHEMRTPLSGILGIADVAL--TTEGNPALLRNYFSMV 889

Query: 253  ENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQS 312
            +N AE LL +IND+LD SR+E+G   L     DL   +  +L      A+ KG+   +  
Sbjct: 890  QNVAEGLLGVINDLLDFSRLEAGRMPLDKVEYDLHTTVRDALAPLAMQAERKGLALELHM 949

Query: 313  NKNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVLDYTKDGV-------VFRVKDT 365
                 L    D  RL QIL N+VGNA+KFT QG V V +  T DGV       VF ++DT
Sbjct: 950  QNGLPLTLRGDPLRLRQILVNLVGNAVKFTPQGTVHVDVS-TGDGVTHDRECLVFTIEDT 1008

Query: 366  GIGIEKNRVEQLFTPFIQADNSITRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTF 425
            G GI   ++  +F  F QAD S +R + G+GLGLAI++HLVEL GG I V+S  G G+ F
Sbjct: 1009 GPGIPHEKLAHIFESFAQADGSYSRQHTGSGLGLAISRHLVELQGGDIGVQSTPGEGSVF 1068

Query: 426  TLYIPLQSRLKNIKPSTSSSQQIVNVKNH------HILVVEDTKTNQMVIQLLLNKLGYD 479
               +P    L +I P+  + +Q V++          IL+ ED + N+  + + L + G+ 
Sbjct: 1069 WFTLP----LGDIHPARRTQRQRVDLDTRTPTTPLRILLAEDNELNREFLTIFLEEGGHS 1124

Query: 480  VTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILR---DKHIEIPIIALTAHT 536
            V  A +G + +++L + HV DLVLMDI MP M+G+ AT+ +R   +    +P+IALTAH+
Sbjct: 1125 VVTACDGYEVLDILHREHV-DLVLMDIQMPRMNGMEATRSIRSSGEAWSTVPVIALTAHS 1183

Query: 537  AGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKR 568
               D+   I  GM+D V KP+   ++   + R
Sbjct: 1184 MAGDRDRFIAEGMSDFVGKPVDRNELHAAIAR 1215